DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm4A and Mllt10

DIOPT Version :9

Sequence 1:NP_610331.1 Gene:Kdm4A / 35744 FlyBaseID:FBgn0033233 Length:495 Species:Drosophila melanogaster
Sequence 2:XP_038951869.1 Gene:Mllt10 / 361285 RGDID:1310874 Length:1068 Species:Rattus norvegicus


Alignment Length:114 Identity:26/114 - (22%)
Similarity:45/114 - (39%) Gaps:33/114 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 QPERYDNWLKGQDMGCHPEEPGKICAAAPPT-------LNEYEKQENLRAAKSEEESPQKRGCSL 389
            ||:.:|:            .||::.:::.||       .:..|::|.::..|.:.....|.|...
  Rat   428 QPKSFDS------------SPGELGSSSLPTAGYKRAQTSGVEEEEAVKEKKRKGNKQSKHGPGR 480

  Fly   390 -AGNGCERN-----AESAEDVDDKASVS-SYSSCRQLQPVVKLRKLPTI 431
             .||..:.|     ..||......||.: |.:||       .|:|.||:
  Rat   481 PKGNKNQENVSHLSVSSASPTSSVASAAGSVTSC-------SLQKSPTL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm4ANP_610331.1 JmjN 17..59 CDD:301729
JmjC 182..298 CDD:202224
Mllt10XP_038951869.1 PHD_AF10_AF17 24..71 CDD:277049
ePHD_AF10 78..206 CDD:277178
CC_AF10 717..780 CDD:411015
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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