Sequence 1: | NP_610331.1 | Gene: | Kdm4A / 35744 | FlyBaseID: | FBgn0033233 | Length: | 495 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245908.1 | Gene: | lid / 33837 | FlyBaseID: | FBgn0031759 | Length: | 1838 | Species: | Drosophila melanogaster |
Alignment Length: | 441 | Identity: | 120/441 - (27%) |
---|---|---|---|
Similarity: | 190/441 - (43%) | Gaps: | 101/441 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 53 PPAEWVPRKSGYDIDNINMTIPAPICQVVTGAHGVYQQINIQQ-RRQMTLRQFMEKAN---SELH 113
Fly 114 QTPRHF-DYDDLERKYWKNITYI----SPLYAADV-----------KGSL----SDEDL--DVWN 156
Fly 157 IGRL----DTILNLVNTDYNIIIDGVNTAYLYFGMWKSSFAWHTEDMDLYSINYLHFGAPKTWYA 217
Fly 218 IPPAYGRRLEKLANETFSENYQECNAYLRHKMTMISPKVLRQHNIPYNKITQEAGEIMITFPFGY 282
Fly 283 HAGFNHGFNGAESTNFASKRWIEYGKRASICRCRSDMVKISMETFVRRFQPERYDNWLKGQDMGC 347
Fly 348 HPE-EPGKI-------CAAAPPTLNEYEK--QENL------RAAKSEEE--SPQKRGCSLAGNGC 394
Fly 395 ERNAESAEDVDDKASVSSYSSCRQLQPVVKLRKLPTIAS-VPEPSSAPKRY 444 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Kdm4A | NP_610331.1 | JmjN | 17..59 | CDD:301729 | 3/5 (60%) |
JmjC | 182..298 | CDD:202224 | 47/115 (41%) | ||
lid | NP_001245908.1 | JmjN | 160..201 | CDD:128818 | |
ARID | 227..312 | CDD:198082 | |||
PHD1_Lid_like | 450..495 | CDD:277078 | 4/24 (17%) | ||
JmjC | 624..740 | CDD:202224 | 47/115 (41%) | ||
zf-C5HC2 | 830..882 | CDD:280996 | 13/59 (22%) | ||
PLU-1 | 896..1229 | CDD:285609 | |||
PHD2_KDM5A | 1295..1351 | CDD:277079 | |||
PHD3_KDM5A_like | 1755..1805 | CDD:277083 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45455779 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR10694 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |