DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm4A and KDM4B

DIOPT Version :10

Sequence 1:NP_610331.1 Gene:Kdm4A / 35744 FlyBaseID:FBgn0033233 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001398077.1 Gene:KDM4B / 23030 HGNCID:29136 Length:1130 Species:Homo sapiens


Alignment Length:448 Identity:237/448 - (52%)
Similarity:305/448 - (68%) Gaps:49/448 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QNKVPRIMTFRPSYEEFQNFSAYIEYIESRGAHLAGLAKIQPPAEWVPRKSGYDIDNINMTIPAP 76
            ||...:||||||:.|||::|:.|:.||||:|||.||||||.||.||.||::..|||::  .||||
Human     9 QNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDV--VIPAP 71

  Fly    77 ICQVVTGAHGVYQQINIQQRRQMTLRQFMEKANSELHQTPRHFDYDDLERKYWKNITYISPLYAA 141
            |.|||||..|::.|.|| |::.||:.::...||||.:.||||.|:||||||||||:|::||:|.|
Human    72 IQQVVTGQSGLFTQYNI-QKKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGA 135

  Fly   142 DVKGSLSDEDLDVWNIGRLDTILNLVNTDYNIIIDGVNTAYLYFGMWKSSFAWHTEDMDLYSINY 206
            |:.|||.|:|:..||||.|.|||::|..:...||:||||.||||||||::|||||||||||||||
Human   136 DISGSLYDDDVAQWNIGSLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINY 200

  Fly   207 LHFGAPKTWYAIPPAYGRRLEKLANETFSENYQECNAYLRHKMTMISPKVLRQHNIPYNKITQEA 271
            ||||.||:||||||.:|:|||:||...|..:.|.|:|:||||||:|||.:|:::.||:::|||||
Human   201 LHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEA 265

  Fly   272 GEIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYGKRASICRCRSDMVKISMETFVRRFQPERY 336
            ||.|||||:|||||||||||.|||||||:.|||:|||.|:.|.||.|||||||:.|||..|||||
Human   266 GEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFVRILQPERY 330

  Fly   337 DNWLKGQDMGC--HPEEPGKICAAAPPTLNEYEK----------------QENLRAAKSEEESPQ 383
            :.|.:|:|:..  |.    :..|...|.|:.:..                :||....|:|||   
Human   331 ELWKQGKDLTVLDHT----RPTALTSPELSSWSASRASLKAKLLRRQISLKENRHWRKTEEE--- 388

  Fly   384 KRGCSLAGNGCERNAESAEDVDDKASVSSYSSCRQLQPVVKLRKLPTIASVPEPSSAP 441
             |..||     ||..|..:    :..:||:.  ::.||     |.|.    ||....|
Human   389 -RKPSL-----ERKKEQTK----RPGLSSHR--KRSQP-----KKPK----PEDPKFP 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm4ANP_610331.1 JmjN 17..59 CDD:472837 28/41 (68%)
JmjC 182..298 CDD:396791 84/115 (73%)
KDM4BNP_001398077.1 JmjN 15..56 CDD:128818 28/40 (70%)
JmjC 176..292 CDD:396791 84/115 (73%)
PHD_JMJD2B 717..822 CDD:277051
ePHD_JMJD2B 831..940 CDD:277184
Tudor_JMJD2B_rpt1 953..1006 CDD:410535
Tudor_JMJD2B_rpt2 1010..1065 CDD:410538
Blue background indicates that the domain is not in the aligned region.

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