DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm4A and KDM4F

DIOPT Version :10

Sequence 1:NP_610331.1 Gene:Kdm4A / 35744 FlyBaseID:FBgn0033233 Length:495 Species:Drosophila melanogaster
Sequence 2:NP_001400684.1 Gene:KDM4F / 100129053 HGNCID:52413 Length:638 Species:Homo sapiens


Alignment Length:378 Identity:188/378 - (49%)
Similarity:255/378 - (67%) Gaps:22/378 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 QNKVPRIMTFRPSYEEFQNFSAYIEYIESRGAHLAGLAKIQPPAEWVPRKSGYDIDNINMTIPAP 76
            ||....||||.|:.|||.:|:.|:.|:||:|||.|||||:.||.||..|:...||::|  .|..|
Human     9 QNTSHTIMTFYPTMEEFADFNTYVAYMESQGAHRAGLAKVIPPKEWKARQMYDDIEDI--LIATP 71

  Fly    77 ICQVVTGAHGVYQQINIQQRRQMTLRQFMEKANSELHQTPRHFDYDDLERKYWKNITYISPLYAA 141
            :.||.:|..||:.|.: ::::.|.:.|:...|||:.:|||.|.::.|||::|||:.....|:|.|
Human    72 LQQVTSGQGGVFTQYH-KKKKAMRVGQYRHLANSKKYQTPPHQNFADLEQRYWKSHPGNPPIYGA 135

  Fly   142 DVKGSLSDEDLDVWNIGRLDTILNLVNTDYNIIIDGVNTAYLYFGMWKSSFAWHTEDMDLYSINY 206
            |:.|||.:|....||:|.|.|||:|:..:..::|:||||.||||||||::|||||||||||||||
Human   136 DISGSLFEESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINY 200

  Fly   207 LHFGAPKTWYAIPPAYGRRLEKLANETFSENYQECNAYLRHKMTMISPKVLRQHNIPYNKITQEA 271
            ||||.|||||.:||.:|:|||.||.|.|..|.:.|..:||||:.:|||.||:::.||:|::||||
Human   201 LHFGEPKTWYVVPPEHGQRLECLARELFPGNSRGCEGFLRHKVALISPTVLKKNGIPFNRMTQEA 265

  Fly   272 GEIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYGKRASICRCRSDMVKISMETFVRRFQPERY 336
            ||.|:|||:|||||||||||.||:.|||:.|||:|||.||.|.|....|..||:.|||..|||.|
Human   266 GEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKVASQCSCGEARVTFSMDAFVRILQPESY 330

  Fly   337 DNWLKGQDMGCHPEEPGKICAAAPPTLNEYEKQENLRAAKSEEESPQKRGCSL 389
            :.|...||:                |:.:|.:.   |.|:|:|.|..:...:|
Human   331 ELWKHRQDL----------------TVVDYMEP---RVAESQEPSNWREDIAL 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm4ANP_610331.1 JmjN 17..59 CDD:472837 25/41 (61%)
JmjC 182..298 CDD:396791 79/115 (69%)
KDM4FNP_001400684.1 JmjN 15..55 CDD:128818 24/39 (62%)
JmjC 176..292 CDD:396791 79/115 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 426..474
Blue background indicates that the domain is not in the aligned region.

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