Sequence 1: | NP_610331.1 | Gene: | Kdm4A / 35744 | FlyBaseID: | FBgn0033233 | Length: | 495 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012808166.1 | Gene: | kdm4c / 100127653 | XenbaseID: | XB-GENE-1011534 | Length: | 1067 | Species: | Xenopus tropicalis |
Alignment Length: | 420 | Identity: | 214/420 - (50%) |
---|---|---|---|
Similarity: | 296/420 - (70%) | Gaps: | 20/420 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 SSFADEEQNKVPRIMTFRPSYEEFQNFSAYIEYIESRGAHLAGLAKIQPPAEWVPRKSGYDIDNI 69
Fly 70 NMTIPAPICQVVTGAHGVYQQINIQQRRQMTLRQFMEKANSELHQTPRHFDYDDLERKYWKNITY 134
Fly 135 ISPLYAADVKGSLSDEDLDVWNIGRLDTILNLVNTDYNIIIDGVNTAYLYFGMWKSSFAWHTEDM 199
Fly 200 DLYSINYLHFGAPKTWYAIPPAYGRRLEKLANETFSENYQECNAYLRHKMTMISPKVLRQHNIPY 264
Fly 265 NKITQEAGEIMITFPFGYHAGFNHGFNGAESTNFASKRWIEYGKRASICRCRSDMVKISMETFVR 329
Fly 330 RFQPERYDNWLKGQDMGCHPEEPGKICAAAPPTL-----------NEYEKQENLRAAKSEEESPQ 383
Fly 384 KRGCSLAGNGCERNAESAED---VDDKASV 410 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Kdm4A | NP_610331.1 | JmjN | 17..59 | CDD:301729 | 26/41 (63%) |
JmjC | 182..298 | CDD:202224 | 82/115 (71%) | ||
kdm4c | XP_012808166.1 | JmjN | 15..56 | CDD:301729 | 26/40 (65%) |
JmjC | 176..292 | CDD:202224 | 82/115 (71%) | ||
PHD_JMJD2C | 655..757 | CDD:277052 | |||
PHD_SF | 766..875 | CDD:304600 | |||
TUDOR | 888..944 | CDD:197660 | |||
TUDOR | 946..1001 | CDD:197660 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 213 | 1.000 | Domainoid score | I2696 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1186832at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000582 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9425 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X490 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.010 |