DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or43b and Or85f

DIOPT Version :10

Sequence 1:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_524289.1 Gene:Or85f / 41119 FlyBaseID:FBgn0037685 Length:392 Species:Drosophila melanogaster


Alignment Length:218 Identity:41/218 - (18%)
Similarity:73/218 - (33%) Gaps:72/218 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ARSPPMAVPMR-------NRHPEGSSASFRN--SYDPGSRKEHSMSKNIEQLLICGLCELRLTVP 72
            :|.||:.....       :.|.|......||  ||.|.:.|...                    |
  Fly     2 SRYPPLVTKKEIIYRRFIDDHNERFDNIVRNPTSYPPRAPKPER--------------------P 46

  Fly    73 KMLNCQHTFCLECLEECLHKQTDRSFIGCITCGTKQLLKDPDLTVLPSNLHIDNMLQMMHPAPSL 137
            :.|...|.:         |...:..:         ||.|        .|..:|.:::::. :||.
  Fly    47 QNLVVSHNY---------HSDVEAEY---------QLSK--------INKKLDRIIEILR-SPST 84

  Fly   138 STSLIRSPV--GSYQLENSRFSEIND-------EIT------ACFRDKMLALQRQQTELLDSSQG 187
            ..:....|:  .:.|.:..::.:|.|       |:|      |..::::..|..:..||....:|
  Fly    85 KKTSQEPPIIDVARQEQTRQYKDICDRLDKLEAELTGKTQFVAPLQNEISLLTNKVHELAQIQEG 149

  Fly   188 ILNDAVCSHELVREKIDQLLASI 210
             |...:.|..:..|.||:||..|
  Fly   150 -LRVKLVSSNIAGEDIDELLKVI 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 26/131 (20%)
Or85fNP_524289.1 7tm_6 68..381 CDD:251636 23/106 (22%)

Return to query results.
Submit another query.