DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43b and Orco

DIOPT Version :9

Sequence 1:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster


Alignment Length:479 Identity:83/479 - (17%)
Similarity:158/479 - (32%) Gaps:134/479 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 METLRNSGLNLKNDFGIGRKIWRVFSFTYNMVILPVSFP---INYVIHLAEFPPELLLQSLQLCL 88
            :..::.|||.:.|..|....:.:|:| :.::|.|.:.|.   :|..:: ||...||...::....
  Fly    21 IRAMKYSGLFMHNFTGGSAFMKKVYS-SVHLVFLLMQFTFILVNMALN-AEEVNELSGNTITTLF 83

  Fly    89 NTWCFALKFFTLIV----YTHRLEL---ANKH--FDELDK--YCVKPAEKRKVRDMVATITRLYL 142
            .|.|.. ||..|.|    :...|.:   .|.|  |.|.|.  :.:..|:.||:..:|...|....
  Fly    84 FTHCIT-KFIYLAVNQKNFYRTLNIWNQVNTHPLFAESDARYHSIALAKMRKLFFLVMLTTVASA 147

  Fly   143 TFVVVYVLYATSTLLDGLLHH-----------RVPYNTYYPFINWRVDRTQMYIQSFLEYFTVGY 196
            |.......:..|..:  ::.|           |:|..::||   |.......|:.||.  |.:.|
  Fly   148 TAWTTITFFGDSVKM--VVDHETNSSIPVEIPRLPIKSFYP---WNASHGMFYMISFA--FQIYY 205

  Fly   197 AIY-----------------------------------VATATDSYPVIYVAALRTHILLLKDRI 226
            .::                                   ::.:.|:|.....|..|:.....|..:
  Fly   206 VLFSMIHSNLCDVMFCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKSEL 270

  Fly   227 IYLGDPSNEGSSDPSYMFKSLVD------------------------------------------ 249
            |:..:.......|.|.::.|..|                                          
  Fly   271 IHNEEKDPGTDMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVR 335

  Fly   250 -----CIKAHRTMLNFCDAIQPIISGTIFAQFIICGSILGIIMINMVLFADQSTRF-GIVIYVMA 308
                 .::.|:.::....||.......:....:..       .|.:.|.|.|:|:. |:.:|...
  Fly   336 SAIKYWVERHKHVVRLVAAIGDTYGAALLLHMLTS-------TIKLTLLAYQATKINGVNVYAFT 393

  Fly   309 V-------LLQTFPLCFYCNAIVDDCKELAHALFHSAWWVQDKRYQRTVIQFL-QKLQQPMTFTA 365
            |       |.|.|..|.:.|.::::...:..|.: |..|.......:|.:|.: |:.|:.|:.:.
  Fly   394 VVGYLGYALAQVFHFCIFGNRLIEESSSVMEAAY-SCHWYDGSEEAKTFVQIVCQQCQKAMSISG 457

  Fly   366 MNIFNINLATNINVAKFAFTVYAI 389
            ...|.::|....:|.....|.:.:
  Fly   458 AKFFTVSLDLFASVLGAVVTYFMV 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 65/401 (16%)
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 68/417 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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