DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43b and Or56a

DIOPT Version :9

Sequence 1:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:456 Identity:82/456 - (17%)
Similarity:168/456 - (36%) Gaps:112/456 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LVYPAPISEPI--------------QSRDSNAYMMETLRNSGLNLKNDFGIGRKIWRVFSFTYNM 57
            |:.|....:||              .|:|.|..::..:|.:.|...........:.|||.     
  Fly     8 LLSPTTFEDPIFGTHLRYFQWYGYVASKDQNRPLLSLIRCTILTASIWLSCALMLARVFR----- 67

  Fly    58 VILPVSFPINYVIHLAEFPPELLLQSLQLCLNTWCFALKFFTLIV-----YTHR------LELAN 111
                     .|             ::|.....::..|:::|.:.:     |..|      |.:|:
  Fly    68 ---------GY-------------ENLNDGATSYATAVQYFAVSIAMFNAYVQRDKVISLLRVAH 110

  Fly   112 KHFDELDKYCVKPAEKRKVRDMVAT--ITR-----LYLTFVVVYVLYATSTLLDGLLHHRVPYNT 169
            .....|    :..|:.|::..:|||  .||     :::..|:..::..:..:...|...:..:|.
  Fly   111 SDIQNL----MHEADNREMELLVATQAYTRTITLLIWIPSVIAGLMAYSDCIYRSLFLPKSVFNV 171

  Fly   170 YYPFINWRVDRTQMYIQSF-----LEYFTVGYA---IYVATATDSYPV--IYVAALRTHILL--- 221
              |.:....:...:..|.|     .:.|.|||.   ..:.....:.|:  .::..|..::.|   
  Fly   172 --PAVRRGEEHPILLFQLFPFGELCDNFVVGYLGPWYALGLGITAIPLWHTFITCLMKYVNLKLQ 234

  Fly   222 -------------LKDRIIYLGDPSNEGSSDPSYMFKSLVDCIKAHRTMLNFCDAIQPIISGTIF 273
                         |..:::.....::|.:.....:||..|   |....:..|...:|.:|...:.
  Fly   235 ILNKRVEEMDITRLNSKLVIGRLTASELTFWQMQLFKEFV---KEQLRIRKFVQELQYLICVPVM 296

  Fly   274 AQFIICGSILGIIMINMVLFA---------DQSTRFGIVIYVMAVLLQTFPLCFYCNAIVDDCKE 329
            |.|||..     ::|..:.||         |....| |.::|||.:|..:.  ::...||:...|
  Fly   297 ADFIIFS-----VLICFLFFALTVGVPSKMDYFFMF-IYLFVMAGILWIYH--WHATLIVECHDE 353

  Fly   330 LAHALFHSAWWVQDKRYQRTVIQFLQKLQQPMTFTAMNIFNINLATNINVAKFAFTVYAIASGMN 394
            |:.|.|...|:..:...|:.::..:...|:||...|: :.::||.|.|::.:.|::.:.:....:
  Fly   354 LSLAYFSCGWYNFEMPLQKMLVFMMMHAQRPMKMRAL-LVDLNLRTFIDIGRGAYSYFNLLRSSH 417

  Fly   395 L 395
            |
  Fly   418 L 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 65/341 (19%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 57/294 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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