DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43b and Or42a

DIOPT Version :9

Sequence 1:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:403 Identity:152/403 - (37%)
Similarity:233/403 - (57%) Gaps:10/403 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FKLVYPAPISEPIQSRDSNAYMMETLRNSGLNL-KNDFGIGRKIWRVFSFTYNM---VILPVSFP 65
            |..:|......|::|||:..|::..:...|:.. ...|.:...:|   ||..|.   ...|:.|.
  Fly     7 FPTLYTQSKDSPVRSRDATLYLLRCVFLMGVRKPPAKFFVAYVLW---SFALNFCSTFYQPIGFL 68

  Fly    66 INYVIHLAEFPPELLLQSLQLCLNTWCFALKFFTLIVYTHRLELANKHFDELDKYCVKPAEKRKV 130
            ..|:.||:||.|...|.|||:..|.|..:.|...:.....|.:.||...||:|:....|.|:.::
  Fly    69 TGYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITDPGERLQI 133

  Fly   131 RDMVATITRLYLTFVVVYVLYATSTLLDGLLHHRVPYNTYYPFINWRVDRTQMYIQSFLEYFTVG 195
            ...|:...|::..|:.||::|||:|.|..:...|.||..||||::||.....:.:|:.||||.:.
  Fly   134 HRAVSLSNRIFFFFMAVYMVYATNTFLSAIFIGRPPYQNYYPFLDWRSSTLHLALQAGLEYFAMA 198

  Fly   196 YAIYVATATDSYPVIYVAALRTHILLLKDRIIYLGDPSNEGSSDPSYMFKSLVDCIKAHRTMLNF 260
            .|.:.....|.|||.:|..||.|:.:..:|:..||....| |.:..|  :.||.||:.|:.:|.|
  Fly   199 GACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYE-SQEQKY--ERLVQCIQDHKVILRF 260

  Fly   261 CDAIQPIISGTIFAQFIICGSILGIIMINMVLFADQSTRFGIVIYVMAVLLQTFPLCFYCNAIVD 325
            .|.::|:||||||.||::.|.:||..:||:||||:..:....:.::.||||:|.|.|..||.:.:
  Fly   261 VDCLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAVLLETTPFCILCNYLTE 325

  Fly   326 DCKELAHALFHSAWWVQDKRYQRTVIQFLQKLQQPMTFTAMNIFNINLATNINVAKFAFTVYAIA 390
            ||.:||.|||.|.|..::||||:|::.||||||||:||.|||:|.|::.|||:|.||:|:|:.:.
  Fly   326 DCYKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLV 390

  Fly   391 SGMNLDQKLSIKE 403
            ..||:.:||:..|
  Fly   391 KQMNISEKLAKSE 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 118/288 (41%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 125/307 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468555
Domainoid 1 1.000 64 1.000 Domainoid score I17159
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I7489
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D31412at7147
OrthoFinder 1 1.000 - - FOG0003850
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
77.000

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