DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43b and Or35a

DIOPT Version :9

Sequence 1:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_723916.1 Gene:Or35a / 34918 FlyBaseID:FBgn0028946 Length:409 Species:Drosophila melanogaster


Alignment Length:479 Identity:77/479 - (16%)
Similarity:142/479 - (29%) Gaps:202/479 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FGIGRKI---WRVFSFTYNMV-----------------ILPVSFPINYVIH-------------- 71
            |..|:|:   |.:..|..|.:                 :|.|:..:.::.|              
  Fly     8 FADGQKVKLAWPLAVFRLNHIFWPLDPSTGKWGRYLDKVLAVAMSLVFMQHNDAELRYLRFEASN 72

  Fly    72 ------LAEFPPELLL-----QSLQLCLNTWCFALKFFTLIVYTHRLELANKHFDELDKYC---- 121
                  |...|..|:|     :||.:.|                        ||::|.|:.    
  Fly    73 RNLDAFLTGMPTYLILVEAQFRSLHILL------------------------HFEKLQKFLEIFY 113

  Fly   122 ----VKPAEK--------------RKVRDMVATITRLYLTFVVVYVLYATSTLLDGLLHHRVPYN 168
                :.|.::              |.|..|...:..|||...|..::..:...|         |:
  Fly   114 ANIYIDPRKEPEMFRKVDGKMIINRLVSAMYGAVISLYLIAPVFSIINQSKDFL---------YS 169

  Fly   169 TYYPFINWRVDRTQMYIQSFLEYFTVGYAIYVATATDSYPV-IYVAALRTHIL------------ 220
            ..:||                               ||.|: |:|..|.|::.            
  Fly   170 MIFPF-------------------------------DSDPLYIFVPLLLTNVWVGIVIDTMMFGE 203

  Fly   221 --LLKDRIIYLGDPSNEGSSDPSYM-----FKSLVDCIKAHRTMLNFCDAIQPIISGTIFAQFII 278
              ||.:.|::|         :.|||     .:..::.|...|...:....::.:|:.|:...   
  Fly   204 TNLLCELIVHL---------NGSYMLLKRDLQLAIEKILVARDRPHMAKQLKVLITKTLRKN--- 256

  Fly   279 CGSILGIIMINMVLFADQSTRFGIVIYVMAVLL-------QTFPLCFYCNAIVDDCK-------- 328
                :.:......|.|..:.|..|:....|.||       .|.|:..|..||....|        
  Fly   257 ----VALNQFGQQLEAQYTVRVFIMFAFAAGLLCALSFKAYTNPMANYIYAIWFGAKTVELLSLG 317

  Fly   329 ----ELA------HALFHSAWWVQDKRYQRTVIQFLQKLQ----------QPMTFTAMNIFNINL 373
                :||      ..:::...|.|..:|.....:.|:.|:          :|...|.:..|.::|
  Fly   318 QIGSDLAFTTDSLSTMYYLTHWEQILQYSTNPSENLRLLKLINLAIEMNSKPFYVTGLKYFRVSL 382

  Fly   374 ATNINVAKFAFTVYAIASGMNLDQ 397
            ...:.:.:.:|:.:...:.|...|
  Fly   383 QAGLKILQASFSYFTFLTSMQRRQ 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 58/365 (16%)
Or35aNP_723916.1 7tm_6 74..393 CDD:251636 65/398 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465932
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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