DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43b and Or19b

DIOPT Version :9

Sequence 1:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster


Alignment Length:452 Identity:105/452 - (23%)
Similarity:187/452 - (41%) Gaps:126/452 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFGHFKL-----VYPAPISEPIQSRDSNAYMMETLRNSGLNLKNDFGIGRKIWRVFSFTYNMVIL 60
            :..|:::     ::| |.......|...||.|                   :|.|   |:::.|.
  Fly    12 LVNHWRIFRIMGIHP-PGKRTFWGRHYTAYSM-------------------VWNV---TFHICIW 53

  Fly    61 PVSFPINYVIHLAEFPPELLLQSLQLCLNTWCFAL-------KFFTLIVYTHRL--ELANKHF-- 114
             |||.:|            ||||..  |.|:|.:|       .:...::...|:  |:.:.|:  
  Fly    54 -VSFSVN------------LLQSNS--LETFCESLCVTMPHTLYMLKLINVRRMRGEMISSHWLL 103

  Fly   115 DELDKY--CVKPAEKRKVRDMVATITRLYLTF----------VVVYVLYATSTLLDGLLHHRVPY 167
            ..|||.  |   |::|::  ::|.|.|....|          ||:.::|.:::....|:     |
  Fly   104 RLLDKRLGC---ADERQI--IMAGIERAEFIFRTIFRGLACTVVLGIIYISASSEPTLM-----Y 158

  Fly   168 NTYYPFINWRVDRTQMYIQSFLEYFTVGYAIYVATAT-----DSYPVIYVAALRTHILLLKDRII 227
            .|:.|: ||: |.|..|:.:.:.:.|.    .:|.||     .|||..|:..:..|...|..|:.
  Fly   159 PTWIPW-NWK-DSTSAYLATAMLHTTA----LMANATLVLNLSSYPGTYLILVSVHTKALALRVS 217

  Fly   228 YLGDPSNEGSSDPSYMFKS-LVDCIKAHRTMLNFCDAIQPIISGTIFAQFI--------ICGSIL 283
            .||    .|:..|:...:: ||..|..|:.:|....:::..:|.|.|.||.        ||..:|
  Fly   218 KLG----YGAPLPAVRMQAILVGYIHDHQIILRLFKSLERSLSMTCFLQFFSTACAQCTICYFLL 278

  Fly   284 ----GIIMINMVLFADQSTRFGIVIYVMAVL-LQTFPLCFYCNAIVDDCKE---LAHALFHSAWW 340
                ||:            ||..:::::.:| .:|..||:....   .|||   |..|::...|.
  Fly   279 FGNVGIM------------RFMNMLFLLVILTTETLLLCYTAEL---PCKEGESLLTAVYSCNWL 328

  Fly   341 VQDKRYQRTVIQFLQKLQQPMTFTAMNIFNINLATNINVAKFAFTVYAIASGMNLDQKLSIK 402
            .|...::|.::..|.:.|.||...:..|..|::.|...:.|.|:|:..:   :|..:|.|::
  Fly   329 SQSVNFRRLLLLMLARCQIPMILVSGVIVPISMKTFTVMIKGAYTMLTL---LNEIRKTSLE 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 78/333 (23%)
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 81/343 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468660
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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