DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cul1 and RTT101

DIOPT Version :9

Sequence 1:NP_523655.1 Gene:Cul1 / 35742 FlyBaseID:FBgn0015509 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_012488.3 Gene:RTT101 / 853400 SGDID:S000003583 Length:842 Species:Saccharomyces cerevisiae


Alignment Length:796 Identity:170/796 - (21%)
Similarity:290/796 - (36%) Gaps:234/796 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 EVLLSRYTKQWKSYQFSSTVLDGICNYLNRNW--VKRECEEGQKGIYKIYRLALV-AWKGHL--- 162
            |::...:|..:|.:|:....:..|.:|:..|:  :::|.......|::.|...|. ..|.|.   
Yeast   154 EIIPKNWTSFYKLFQYVMGAVGPIISYVPVNYPMIRKELGFETLTIFQYYDSKLFECMKSHFGRE 218

  Fly   163 FQVLNE----------PVTKAVLKSIEEERQGKLINRSLVRDVIECYVELSFNEEDTD------- 210
            |..|..          |:|..:|   |:|       ..::|.:..|    :|:.|...       
Yeast   219 FSTLVSATIHHYIHMFPITNTML---EKE-------VPMLRIMSNC----NFSIEGLSPKDFYMK 269

  Fly   211 ------AEQQKLSVYKQNFEN-KFIADTSAFY------EKESDA--------FLSTNTVTEYLKH 254
                  .|:..|....:.|:| |.:...:|..      |..|||        .|:..:::||::.
Yeast   270 TLRQYYCEESNLRPRLETFKNFKVLLTRNALLASLFSPEWVSDANDLFISHLLLNKKSISEYIEI 334

  Fly   255 VENRLEEETQRV-------------RGFNSKNGLSYLHETTADVLKSTCEEVLIEKHLKIFH--- 303
            .::..:||.:|.             ..|.:||.||        ..|..|::.:.|| ||..:   
Yeast   335 GKDTYDEEKERYFKTETHFSLLMFRNAFEAKNMLS--------KFKEFCDDAVSEK-LKAAYGSN 390

  Fly   304 --TE--FQNLLNADRNDDLKRMYS---------LVALSSKNLTDLKSILENHILHQGTEAIAKCC 355
              ||  |..::.....|.|| :||         |:..:||.:.......|:|:.     .|.:..
Yeast   391 HDTERLFDEVVQLANVDHLK-IYSDSIEYHLCNLLGSTSKAIEQYVKYFESHLF-----IIVRKI 449

  Fly   356 TTDAANDPKTYVQTILDVHKKYNALVLTAFNNDNGFVAALDKACGKFINSNVVTIANSASKSPEL 420
            .|...:.|:       |:..||        .|:|..:..|     ||:  |:.|..|...:|   
Yeast   450 KTTKKDLPR-------DMKIKY--------LNENLPILRL-----KFV--NLPTFPNFFERS--- 489

  Fly   421 LAKYCDLLLKKSSKNPEDKELEDNLNQVMVVFKYIEDKDVFQKYYSKML---AKRLVNHTSASDD 482
                   :.:|:.       |:.:.|...:       ||:...|...::   .:|::.:.|..|:
Yeast   490 -------IFRKTI-------LQSDQNSSFI-------KDILPVYKDSLMELFKQRIITNVSQEDE 533

  Fly   483 AEAMMISKLKQTCGY--EYTVKLQRMFQDIGVSKDLNSYFKQYLA-EKNLTMEIDFG---IEVLS 541
            ..            |  :|...|.:.||.:.|..||...:..:|: .:|:...:.||   .|..|
Yeast   534 MR------------YRDQYQPYLSQFFQPVEVMADLRIKYASFLSFYENIEAAVKFGKTYNENNS 586

  Fly   542 SGSWP-----------FQLSN----NFLLPSELERSVRQFNEFYAARHSGRKLN----------- 580
            ...:|           ||.||    ||:||.|::.:   :|:|....|...|:.           
Yeast   587 KSFFPLIFDRERIPKVFQQSNEVKKNFVLPQEMDDT---WNQFLRNYHEQNKVEDSDASKKELYP 648

  Fly   581 -WLYQMCKGELIMNVNRNNSSTYTLQAST--------FQMSVLLQFNDQLSFTVQQLQDNTQTQQ 636
             |....|:.|          |.|.:|..|        ||..||..||:....|:|.:.:.|:...
Yeast   649 MWNLHHCEVE----------SPYIIQDGTNLIFELTLFQTCVLTLFNESDHLTLQVISEQTKLAY 703

  Fly   637 ENLIQVLQILLKAKVLTSS-DNENSLTPESTVELFLDYKNKKRRININQPLKTELKVE----QET 696
            ::|..||:.....|:||.. ||..|:. ||........||.|.|:.:  |....|:..    :.|
Yeast   704 KDLALVLKSFCNYKILTRDIDNTYSIN-ESFKPDMKKVKNGKLRVVL--PRTASLQSSNTGGERT 765

  Fly   697 VHKHIEEDR----KLLIQAAIVRIMKM-RKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDILIE 756
            ...|.|...    :.|::|.|.|.:|. |..|::.:|...|..|:...   .|...|..:..|:.
Yeast   766 SSAHHEGSNSQWTQELLKACITRSVKSERNGLDYDHLFETVKQQIKGF---SVGEFKDALAKLLR 827

  Fly   757 KEYLERMEGHKDTYSY 772
            .:::.|.|. ..||.|
Yeast   828 DKFITRDES-TATYKY 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul1NP_523655.1 Cullin 21..669 CDD:279260 143/682 (21%)
CULLIN 454..593 CDD:214545 37/174 (21%)
Cullin_Nedd8 701..765 CDD:214883 15/68 (22%)
RTT101NP_012488.3 COG5647 <519..842 CDD:227934 84/354 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5647
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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