DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul1 and AT1G59800

DIOPT Version :10

Sequence 1:NP_523655.1 Gene:Cul1 / 35742 FlyBaseID:FBgn0015509 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_176189.1 Gene:AT1G59800 / 842273 AraportID:AT1G59800 Length:255 Species:Arabidopsis thaliana


Alignment Length:268 Identity:57/268 - (21%)
Similarity:119/268 - (44%) Gaps:45/268 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 WSELVEGIMQVF-----EHEKSLTRSQYMRFYTHVYDYCTSVSAAPSGRSSGKTGGAQLVGKKLY 79
            ||.:.:|..::.     |.|.:..:...|..:|..|..|                 |....::||
plant    13 WSNIQQGFTKLIRMIEGESEPAFNQEIMMMMHTATYRIC-----------------AYKNPQQLY 60

  Fly    80 DRLEQFLKSYLSELLTKFKAISGEEVLLSRYTKQWKSYQFSSTVLDGICNYLNRNWVKRECEEGQ 144
            |:..:.:::|..:.:........:|.:|....|:|.:::....:......||:.:::.:      
plant    61 DKYRELIENYAIQTVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYLDDSFLSK------ 119

  Fly   145 KGIYKIYRLALVAWKGHLFQVLNEPVTKAVLKSIEEERQGKLINRSLVRDVIECYVELSFNEEDT 209
            ||:..:..:.|..::..:::.:.....:|:|..|.:||:|:.|:|.|||:||:.:||   |...|
plant   120 KGLPSLREVGLNCFRDQVYREMQSMAAEAILALIHKEREGEQIDRELVRNVIDVFVE---NGMGT 181

  Fly   210 DAEQQKLSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQRVRGFNSKNG 274
                  |..|:::||...:.||:::|..::..::...:..:|....:..|:.|.:||        
plant   182 ------LKKYEEDFERLMLQDTASYYSSKASRWIQEESCLDYTLKPQQCLQRERERV-------- 232

  Fly   275 LSYLHETT 282
            ..|||.||
plant   233 THYLHPTT 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul1NP_523655.1 Cullin 20..673 CDD:459983 57/268 (21%)
Cullin_Nedd8 704..765 CDD:463146
AT1G59800NP_176189.1 Cullin 41..>247 CDD:459983 52/240 (22%)
Blue background indicates that the domain is not in the aligned region.

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