DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cul1 and Cacul1

DIOPT Version :10

Sequence 1:NP_523655.1 Gene:Cul1 / 35742 FlyBaseID:FBgn0015509 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_084473.1 Gene:Cacul1 / 78832 MGIID:1926082 Length:377 Species:Mus musculus


Alignment Length:253 Identity:53/253 - (20%)
Similarity:94/253 - (37%) Gaps:83/253 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 LDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNPEDKELEDNLNQVMVVFKYIED-- 457
            ::.:..||: .||:||.:..|.....|....|.||.:|   |.|        .:.:.::.|..  
Mouse   123 INTSTSKFL-MNVITIEDYKSTYWPKLDGAIDQLLTQS---PGD--------YIPISYEQIYSCV 175

  Fly   458 -KDVFQKYYSKM---LAKRLVNHTS-ASDDAEA----MMISKLKQTCG----------------- 496
             |.|.|::..:|   |.|::.:|.. .|.:.:|    :.|.:.....|                 
Mouse   176 YKCVCQQHSEQMYSDLIKKITSHLERVSKELQASPPDLYIERFNIALGQYMGALQSIVPLFIYMN 240

  Fly   497 -YEYTVKLQRMFQDIGVSKDLNSYFKQYLAEKNLTMEIDFGIEVLSSGSWPFQLSNN-------- 552
             :....||.|..:|     ||...|.:::|||::...:..   :|.:.|.|||::.:        
Mouse   241 KFYIETKLNRDLKD-----DLIKLFTEHVAEKHIYSLMPL---LLEAQSTPFQVTPSTMANIVKG 297

  Fly   553 --FLLPSELERSVRQFNEF---------------YAARHSGRKLNWLYQMCKGELIMN 593
              .|.|..::.:...|::|               |||:.         |..:.|||.|
Mouse   298 LYTLRPEWVQMAPTLFSKFIPNILPPAVESELSEYAAQD---------QKLQRELIQN 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul1NP_523655.1 Cullin 20..673 CDD:459983 53/253 (21%)
Cullin_Nedd8 704..765 CDD:463146
Cacul1NP_084473.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63
Cullin 145..>269 CDD:459983 29/139 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 347..377 53/253 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.