DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cul1 and Cul2

DIOPT Version :10

Sequence 1:NP_523655.1 Gene:Cul1 / 35742 FlyBaseID:FBgn0015509 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_083678.2 Gene:Cul2 / 71745 MGIID:1918995 Length:745 Species:Mus musculus


Alignment Length:785 Identity:265/785 - (33%)
Similarity:438/785 - (55%) Gaps:67/785 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KLVNLDDIWSELVEGIMQVFEHEKSLTRSQYMRFYTHVYDYCTSVSAAPSGRSSGKTGGAQLVGK 76
            ::|:.|:.|::|:..|..|...| .:.|:.:...::.:|..|.   |.|           :.:|:
Mouse     6 RVVDFDETWNKLLTTIKAVVMLE-YVERATWNDRFSDIYALCV---AYP-----------EPLGE 55

  Fly    77 KLYDRLEQFLKSYLSELLTKFKAISGEEVLLSRYTKQWKSYQFSSTVLDGICNYLNRNWVKR--- 138
            :||...:.||:|::..|..  :.:..||.:|..|.:.|:.|...:..:|.:..|||..::|:   
Mouse    56 RLYAETKIFLESHVRHLYK--RVLESEEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQYIKKNKL 118

  Fly   139 ---ECEEGQKGI------YKIYRLALVAWKGHLFQVLNEPVTKAVLKSIEEERQGKLINRSLVRD 194
               :.:.|..|:      .:|..|||..|:..:.:.|...:.:.:|:.|:.:|.|:..|:.::..
Mouse   119 TEADIQYGYGGVDMNEPLMEIGELALDMWRKLMVEPLQNILIRMLLREIKNDRGGEDPNQKVIHG 183

  Fly   195 VIECYVELSFNEEDTDAEQQK----LSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYLKHV 255
            ||..:|.:         ||.|    |..|:..|.:.|:.:|..:|::|:...|..:..::|::.|
Mouse   184 VINSFVHV---------EQYKKKFPLKFYQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKV 239

  Fly   256 ENRLEEETQRVRGFNSKNGLSYLHETTADVLKSTCEEVLIEKHLKIFHTEFQNLLNADRNDDLKR 320
            ..||::|..|.|        .|||.::...:...|::.::..||:..|:|..:::..:|.:|:..
Mouse   240 LGRLKDEEIRCR--------KYLHPSSYTKVIHECQQRMVADHLQFLHSECHSIIQQERKNDMAN 296

  Fly   321 MYSLVALSSKNLTDLKSILENHILHQGTEAIAKCCTTDAAND--PKTYVQTILDVHKKYNALVLT 383
            ||.|:...|..|..:...|:.||..:|..|     |::...:  |..:|:::|:||.|:..|:.|
Mouse   297 MYVLLRAVSSGLPHMIEELQKHIHDEGLRA-----TSNLTQEHMPTLFVESVLEVHGKFVQLINT 356

  Fly   384 AFNNDNGFVAALDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNPEDKELEDNLNQV 448
            ..|.|..|::|||||....:|...   ..|..|:|||||||||.|||||:|...:.|:||.|...
Mouse   357 VLNGDQHFMSALDKALTSVVNYRE---PKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDKLTSF 418

  Fly   449 MVVFKYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQDIGVS 513
            :.|||||:|||||||:|::||||||::..|.|.|:|..||:||||.||||:|.||.||:.|:.||
Mouse   419 ITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVS 483

  Fly   514 KDLNSYFKQYLAEKNLTME--IDFGIEVLSSGSWPFQL--SNNFLLPSELERSVRQFNEFYAARH 574
            .|||:.|..::..::..::  |.|.|.||.:|:||...  |:.|.:|.|||:||:.|..||:...
Mouse   484 ADLNNKFNNFIRNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQHF 548

  Fly   575 SGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSFTVQQLQDNTQTQQENL 639
            |||||.||:.:|.||:.||.   ....|....:|:||:|||.||:..:.:.::|||:||..::.|
Mouse   549 SGRKLTWLHYLCTGEVKMNY---LGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNEKEL 610

  Fly   640 IQVLQILLKAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQPLKTELKVEQETVHKHIEED 704
            .:.::.||..|::.....:..:..||:..|.:.:.:|:.:..|...::.:...|.|.....::||
Mouse   611 TKTIKSLLDVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDED 675

  Fly   705 RKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDILIEKEYLERMEGHKDT 769
            ||:.:|||||||||.||.|.|..||.||::|...||.|.:.:|||||::||:|:|:||.:...|.
Mouse   676 RKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADE 740

  Fly   770 YSYLA 774
            |||:|
Mouse   741 YSYVA 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul1NP_523655.1 Cullin 20..673 CDD:459983 218/674 (32%)
Cullin_Nedd8 704..765 CDD:463146 35/60 (58%)
Cul2NP_083678.2 Cullin 14..644 CDD:459983 218/674 (32%)
Cullin_Nedd8 675..735 CDD:463146 35/59 (59%)

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