DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cul1 and Cul1

DIOPT Version :10

Sequence 1:NP_523655.1 Gene:Cul1 / 35742 FlyBaseID:FBgn0015509 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_036172.1 Gene:Cul1 / 26965 MGIID:1349658 Length:776 Species:Mus musculus


Alignment Length:789 Identity:493/789 - (62%)
Similarity:599/789 - (75%) Gaps:32/789 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NRSGNSQTTQKLVNLDDIWSELVEGIMQVFEHEKSLTRSQYMRFYTHVYDYCTSV---------S 57
            |||.|.... |.:.||.||.:|..||.||:..: |:.:|:||..|||||:|||||         .
Mouse     4 NRSQNPHGL-KQIGLDQIWDDLRAGIQQVYTRQ-SMAKSRYMELYTHVYNYCTSVHQSNQARGAG 66

  Fly    58 AAPSGRSSGKT-GGAQLVGKKLYDRLEQFLKSYLSELLTKFKAISGEEVLLSRYTKQWKSYQFSS 121
            ..||....|:| ||||.||.:||.||::|||:||:.||...:.:..|.| |..||:||:.|:|||
Mouse    67 VPPSKSKKGQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESV-LKFYTQQWEDYRFSS 130

  Fly   122 TVLDGICNYLNRNWVKRECEEGQKGIYKIYRLALVAWKGHLFQVLNEPVTKAVLKSIEEERQGKL 186
            .||:|||.||||:||:|||:||:||||:||.||||.|:..||:.||:.||.||||.||:||.|:.
Mouse   131 KVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGET 195

  Fly   187 INRSLVRDVIECYVELSFNEEDTDAEQQKLSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEY 251
            ||..|:..|::.||||..||:|..|:...|:|||::||::|:|||..||.:||..||..|.||||
Mouse   196 INTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEY 260

  Fly   252 LKHVENRLEEETQRVRGFNSKNGLSYLHETTADVLKSTCEEVLIEKHLKIFHTEFQNLLNADRND 316
            :|..|.||.||.:||:        .||||:|.|.|...||:|||||||:||||||||||:||:|:
Mouse   261 MKKAEARLLEEQRRVQ--------VYLHESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNE 317

  Fly   317 DLKRMYSLVALSSKNLTDLKSILENHILHQGTEAIAKCCTTDAANDPKTYVQTILDVHKKYNALV 381
            ||.|||:||:.....|.:||.:||.||.:||..||.||... |.||||.||||:|||||||||||
Mouse   318 DLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEA-ALNDPKMYVQTVLDVHKKYNALV 381

  Fly   382 LTAFNNDNGFVAALDKACGKFINSNVVT-IANSASKSPELLAKYCDLLLKKSSKNPEDKELEDNL 445
            ::|||||.|||||||||||:|||:|.|| :|.|:||||||||:|||.||||||||||:.||||.|
Mouse   382 MSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKKSSKNPEEAELEDTL 446

  Fly   446 NQVMVVFKYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQDI 510
            ||||||||||||||||||:|:||||||||:..||||||||.|||||||.||:|||.|||||||||
Mouse   447 NQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDI 511

  Fly   511 GVSKDLNSYFKQYLAEKNLTMEIDFGIEVLSSGSWPFQLSNNFLLPSELERSVRQFNEFYAARHS 575
            |||||||..||::|.... .:::||.|:||||||||||.|..|.||||||||.::|..|||:|||
Mouse   512 GVSKDLNEQFKKHLTNSE-PLDLDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYASRHS 575

  Fly   576 GRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSFTVQQLQDNTQTQQENLI 640
            ||||.||||:.||||:.|..:|.   ||||||||||::|||:|.:.::|||||.|:||.:.:.|.
Mouse   576 GRKLTWLYQLSKGELVTNCFKNR---YTLQASTFQMAILLQYNTEDAYTVQQLTDSTQIKMDILA 637

  Fly   641 QVLQILLKAKVLTSSD-----NENSLTPESTVELFLDYKNKKRRININQPLKTELKVEQETVHKH 700
            ||||||||:|:|...|     :|..|.|::.::|:|.|||||.|:|||.|:|||.|.||||.||:
Mouse   638 QVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTHKN 702

  Fly   701 IEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFKPKVPVIKKCIDILIEKEYLERMEG 765
            |||||||||||||||||||||.|.|..|:.|||.|||:||||:|||||||||||||||||||::|
Mouse   703 IEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDG 767

  Fly   766 HKDTYSYLA 774
            .||||||||
Mouse   768 EKDTYSYLA 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cul1NP_523655.1 Cullin 20..673 CDD:459983 403/668 (60%)
Cullin_Nedd8 704..765 CDD:463146 50/60 (83%)
Cul1NP_036172.1 Cullin 21..660 CDD:459983 399/654 (61%)
Cullin_Nedd8 706..768 CDD:463146 50/61 (82%)

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