DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phr and PHR1

DIOPT Version :9

Sequence 1:NP_523653.2 Gene:phr / 35735 FlyBaseID:FBgn0003082 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_015031.1 Gene:PHR1 / 854568 SGDID:S000005913 Length:565 Species:Saccharomyces cerevisiae


Alignment Length:581 Identity:115/581 - (19%)
Similarity:200/581 - (34%) Gaps:173/581 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MKRTKAQKAGPSKKAAKNEKASSEPKSDQESSDEEASTSKALLVSKPDYQNFEQF--LTHLEHQR 83
            ||||..        ::.|..||...:.|.|                   .:|||:  |....:.|
Yeast     1 MKRTVI--------SSSNAYASKRSRLDIE-------------------HDFEQYHSLNKKYYPR 38

  Fly    84 VCTAANIQEFS--FRKKRVRVLSKTEDVKESS---LGGVVYWMSRDGRVQDNWAL-----LFAQR 138
            ..|.....:|:  .|.|.:.::.|.:..:::|   :..|::|...|.|:.||..|     ||.|.
Yeast    39 PITRTGANQFNNKSRAKPMEIVEKLQKKQKTSFENVSTVMHWFRNDLRLYDNVGLYKSVALFQQL 103

  Fly   139 LALKLELPLTVVFCLVPKFLNATIR---HYKFMMGGLQEVEQQCRALDIP-----FHLLMGSAVE 195
            .....:..|..|:.:......|.:.   ...|:||.|:.::|....|.||     || ...|.:.
Yeast   104 RQKNAKAKLYAVYVINEDDWRAHMDSGWKLMFIMGALKNLQQSLAELHIPLLLWEFH-TPKSTLS 167

  Fly   196 KLPQFVK---------SKDIGAVVCDFAPLRLPRQWVEDVGKALPKSVPLVQVDAHN-------- 243
            ...:||:         |...|.::         ...:|.....|.:.:.|::.:.|.        
Yeast   168 NSKEFVEFFKEKCMNVSSGTGTII---------TANIEYQTDELYRDIRLLENEDHRLQLKYYHD 223

  Fly   244 ---VVPLWVASDKQEYAARTIRNKINSKLGEYLSVFPP--------VVRHPHGTG--C------- 288
               |.|..:.:|:                |...|||.|        |..:...|.  |       
Yeast   224 SCIVAPGLITTDR----------------GTNYSVFTPWYKKWVLYVNNYKKSTSEICHLHIIEP 272

  Fly   289 -KNVNTVDWSAAYASLQCD--MEVDEVQWAKP--GYKAACQQLYEFCSRRLRHFNDKRNDPTADA 348
             |...|.:......||..:  ..:.:.:|..|  ..:||..:|.:|...:...:|::::......
Yeast   273 LKYNETFELKPFQYSLPDEFLQYIPKSKWCLPDVSEEAALSRLKDFLGTKSSKYNNEKDMLYLGG 337

  Fly   349 LSGLSPWLHFGHISAQRCALEVQRFRGQHKASADAFCEEAIVRRELADN---------------- 397
            .||||.::..|.||.:  .:..|.|:.         |...|:.:.|.||                
Yeast   338 TSGLSVYITTGRISTR--LIVNQAFQS---------CNGQIMSKALKDNSSTQNFIKEVAWRDFY 391

  Fly   398 -FCFYNEHYDSLKGLSSWAYQTLDAHRKDKRDPCYSLEELEKSLTYDDLWNSAQLQLVREGKMHG 461
             .|..|..|.|: |: .:...|||.  |.:.:| .:.|:.....|...:.::...:|:..|.::.
Yeast   392 RHCMCNWPYTSM-GM-PYRLDTLDI--KWENNP-VAFEKWCTGNTGIPIVDAIMRKLLYTGYINN 451

  Fly   462 FLRM----YWAKKIL-EWTATPEHALEYAILLNDKYSLDGRDPNGYVGCMWSIGGVHDMGW 517
            ..||    :.:|.:| :|.......:        |:.:|| |.:..||           ||
Yeast   452 RSRMITASFLSKNLLIDWRWGERWFM--------KHLIDG-DSSSNVG-----------GW 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phrNP_523653.2 phr2 93..547 CDD:129679 100/507 (20%)
DNA_photolyase 117..278 CDD:279247 39/193 (20%)
PHR1NP_015031.1 PhrB 75..565 CDD:223492 95/480 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0415
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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