DRSC/TRiP Functional Genomics Resources

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Protein Alignment phr and cry3a

DIOPT Version :9

Sequence 1:NP_523653.2 Gene:phr / 35735 FlyBaseID:FBgn0003082 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_571866.2 Gene:cry3a / 573209 ZFINID:ZDB-GENE-010426-4 Length:659 Species:Danio rerio


Alignment Length:500 Identity:102/500 - (20%)
Similarity:166/500 - (33%) Gaps:143/500 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 VYWMSRDGRVQDNWALLFAQRLALKLELPLTVVFCLVPKFL---NATIRHYKFMMGGLQEVEQQC 179
            ::|..:..|:.||.||..|.|.|..:.    .|:.|.|.|.   |..:..::|::..|.:::...
Zfish     6 IHWFRKGLRLHDNPALQEAVRGADTVR----CVYFLDPWFAGSSNLGVNRWRFLLQCLDDLDSNL 66

  Fly   180 RALDIPFHLLMGSAVEKLPQFVKSKDIGAVVCDFAPLRLPRQWVEDVGK---------ALPKSVP 235
            |.|:....::.|......|:..|...|..:..::..        |..||         |:...|.
Zfish    67 RKLNSRLFVVRGQPANVFPRLFKEWKISRLTFEYDS--------EPFGKERDAAIKKLAMEAGVE 123

  Fly   236 LVQVDAHNVV-------------PLWV--------ASDKQEYAARTIRNKINSKLGEYLSVFPPV 279
            ::...:|.:.             ||..        ..|..|....|:.|.|   :|  ..|.|  
Zfish   124 VIVKTSHTLYNLDKIIELNGGQPPLTYKRFQTLISRMDPPEMPVETLSNSI---MG--CCVTP-- 181

  Fly   280 VRHPHGT--GCKNVNTVDWSAAYASLQCDME-VDEVQWAKPGYKAACQQLYEFCSRRLRHF---- 337
            |...||.  |..::.         .|..|:| :....|  ||.:.      |..:|..||.    
Zfish   182 VSEDHGDKYGVPSLE---------ELGFDIEGLPSAVW--PGGET------EALTRIERHLERKA 229

  Fly   338 ---NDKRNDPTADAL----SGLSPWLHFGHISAQRCALEV-QRFRGQHKASADAF-CEEAIVRRE 393
               |.:|....|::|    :||||:|.||.:|.:....:: ..:|...|.|.... ....::.||
Zfish   230 WVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKTSTPPLSLYGQLLWRE 294

  Fly   394 LADNFCFYNEHYDSLKG---------------LSSWAYQTLDAHRKDKRDPCYSLEELEKSLTYD 443
            ........|..:|.::|               |:.||                   |.:....:.
Zfish   295 FFYTAATTNPRFDKMEGNPICVRIPWDKNPEALAKWA-------------------EAKTGFPWI 340

  Fly   444 DLWNSAQLQLVREGKMHGFLRMYWAKKILE---WTATPEHALEYAILLNDKYSLDGRDPNGYVGC 505
            |   :...||.:||.:|...|...|..:..   |.:..|....:..||.|              .
Zfish   341 D---AIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLD--------------A 388

  Fly   506 MWSIGGVHDMGWKERAIFGKVRYMNY--QGCRRKFDVNA-FVMRY 547
            .||:.....| |...:.|.:..:..|  .|..|:.|.|. |:.||
Zfish   389 DWSVNAGSWM-WLSCSSFFQQFFHCYCPVGFGRRTDPNGDFIRRY 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phrNP_523653.2 phr2 93..547 CDD:129679 100/498 (20%)
DNA_photolyase 117..278 CDD:279247 37/192 (19%)
cry3aNP_571866.2 PhrB 5..491 CDD:223492 101/499 (20%)
DNA_photolyase 5..166 CDD:279247 32/171 (19%)
FAD_binding_7 213..486 CDD:281440 53/262 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0415
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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