DRSC/TRiP Functional Genomics Resources

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Protein Alignment phr and cpdp

DIOPT Version :9

Sequence 1:NP_523653.2 Gene:phr / 35735 FlyBaseID:FBgn0003082 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_005168471.1 Gene:cpdp / 394039 ZFINID:ZDB-GENE-040426-1644 Length:534 Species:Danio rerio


Alignment Length:457 Identity:263/457 - (57%)
Similarity:327/457 - (71%) Gaps:3/457 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 QEFSFRKKRVRVLSKTEDVKESSLGGVVYWMSRDGRVQDNWALLFAQRLALKLELPLTVVFCLVP 155
            |...|.|||:|.||.|:.||:|| .||:||||||.|:||||||:::|:|||..:|||.:.|||||
Zfish    66 QGCEFNKKRLRYLSDTQKVKQSS-QGVLYWMSRDQRIQDNWALIYSQQLALAEKLPLHICFCLVP 129

  Fly   156 KFLNATIRHYKFMMGGLQEVEQQCRALDIPFHLLMGSAVEKLPQFVKSKDIGAVVCDFAPLRLPR 220
            |||:||.|.|.||:.|||||.::|::|||.||||.|..|..||.||||.:|||||.||.|||:..
Zfish   130 KFLDATYRQYAFMLKGLQEVVKECKSLDIEFHLLSGEPVHNLPAFVKSWNIGAVVTDFNPLRISL 194

  Fly   221 QWVEDVGKALPKSVPLVQVDAHNVVPLWVASDKQEYAARTIRNKINSKLGEYLSVFPPVVRHPHG 285
            ||::.|.|.||..:|.:|||||||||.|.||.|.||.|||||.||...|.|:|:..|.|..||: 
Zfish   195 QWIDTVKKHLPSDIPFIQVDAHNVVPCWEASTKLEYGARTIRGKITKHLQEFLTDMPLVDTHPY- 258

  Fly   286 TGCKNVNTVDWSAAYASLQCDMEVDEVQWAKPGYKAACQQLYEFCSRRLRHFNDKRNDPTADALS 350
            ...:....:||....:||:.|..|.||:||:||.......|..|..:||..|...||:|.:||:|
Zfish   259 CASRAAKIIDWEEVLSSLEVDHNVCEVEWAQPGTTGGMFMLESFIDQRLHIFATHRNNPNSDAVS 323

  Fly   351 GLSPWLHFGHISAQRCALEVQRFRGQHKASADAFCEEAIVRRELADNFCFYNEHYDSLKGLSSWA 415
            .||||:|.|.:||||..::|:|.:...::.| :|.||.:|||||||||||||::||::.|...||
Zfish   324 HLSPWIHAGQLSAQRVVMQVKRKKNASESVA-SFIEEIVVRRELADNFCFYNQNYDNISGAYDWA 387

  Fly   416 YQTLDAHRKDKRDPCYSLEELEKSLTYDDLWNSAQLQLVREGKMHGFLRMYWAKKILEWTATPEH 480
            .:||..|.||:|...|:.:|||.:.|:|.|||:||.||:.|||||||||||||||||||||:||.
Zfish   388 KKTLQEHAKDRRQYLYTKKELESAETHDQLWNAAQRQLLLEGKMHGFLRMYWAKKILEWTASPEE 452

  Fly   481 ALEYAILLNDKYSLDGRDPNGYVGCMWSIGGVHDMGWKERAIFGKVRYMNYQGCRRKFDVNAFVM 545
            ||..||.|||:.||||.||||||||||||.|:||.||.||.||||:|||||.||:|||||..|..
Zfish   453 ALSIAIYLNDRLSLDGCDPNGYVGCMWSICGIHDQGWAERPIFGKIRYMNYAGCKRKFDVEQFER 517

  Fly   546 RY 547
            :|
Zfish   518 KY 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phrNP_523653.2 phr2 93..547 CDD:129679 261/453 (58%)
DNA_photolyase 117..278 CDD:279247 98/160 (61%)
cpdpXP_005168471.1 phr2 68..519 CDD:129679 261/453 (58%)
DNA_photolyase 91..251 CDD:279247 98/159 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582106
Domainoid 1 1.000 317 1.000 Domainoid score I1237
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H17893
Inparanoid 1 1.050 539 1.000 Inparanoid score I1152
OMA 1 1.010 - - QHG62425
OrthoDB 1 1.010 - - D554994at33208
OrthoFinder 1 1.000 - - FOG0010657
OrthoInspector 1 1.000 - - oto40688
orthoMCL 1 0.900 - - OOG6_104135
Panther 1 1.100 - - LDO PTHR10211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R17283
SonicParanoid 1 1.000 - - X8149
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.940

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