DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phr and Cry2

DIOPT Version :9

Sequence 1:NP_523653.2 Gene:phr / 35735 FlyBaseID:FBgn0003082 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_034093.1 Gene:Cry2 / 12953 MGIID:1270859 Length:592 Species:Mus musculus


Alignment Length:446 Identity:88/446 - (19%)
Similarity:144/446 - (32%) Gaps:171/446 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 VKESSLG----GVVYWMSRDGRVQDNWALLFAQRLALKLELPLTVVFCLVPKFLNAT---IRHYK 166
            |...|:|    ..|:|..:..|:.||.|||.|.|.|..:.    .|:.|.|.|..::   |..::
Mouse    11 VPAQSMGADGASSVHWFRKGLRLHDNPALLAAVRGARCVR----CVYILDPWFAASSSVGINRWR 71

  Fly   167 FMMGGLQEVEQQCRALDIPFHLLMGSAVEKLPQFVKSKDIGAVVCDFAPLRLPRQWVEDVGK--- 228
            |::..|::::...|.|:....::.|...:..|:..|...:..:..::..        |..||   
Mouse    72 FLLQSLEDLDTSLRKLNSRLFVVRGQPADVFPRLFKEWGVTRLTFEYDS--------EPFGKERD 128

  Fly   229 ------ALPKSVPLVQVDAHNVVPLWVASDK-------------QEYAARTIRNKINSKLGEYLS 274
                  |....|.:|..::|.:..|    |:             :.:.|...|.::..|      
Mouse   129 AAIMKMAKEAGVEVVTENSHTLYDL----DRIIELNGQKPPLTYKRFQALISRMELPKK------ 183

  Fly   275 VFPPVVRHPHGTGCKNVNTVDWSAAYASLQ---CDMEVDE-----------------------VQ 313
               |.|                  |.:|.|   |..|:.|                       ..
Mouse   184 ---PAV------------------AVSSQQMESCRAEIQENHDDTYGVPSLEELGFPTEGLGPAV 227

  Fly   314 WAKPGYKAACQQLYEFCSRRLRHFNDKRNDPTADAL----SGLSPWLHFGHISAQRCALEVQRFR 374
            | :.|...|..:|.:...|:....|.:|....|::|    :||||:|.||.:|   |.|...|..
Mouse   228 W-QGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLS---CRLFYYRLW 288

  Fly   375 GQHKASADAFCEEAIVRR----------ELADNFCFY-----NEHYDSLKG-------------- 410
            ..:|.          |:|          :|.....||     |..:|.::|              
Mouse   289 DLYKK----------VKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWDRNPE 343

  Fly   411 -LSSWA-----YQTLDA------------HRKDKRDPCYSLEELEKSLTYDDLWNS 448
             |:.||     :..:||            |.......|:        ||..|||.|
Mouse   344 ALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACF--------LTRGDLWVS 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phrNP_523653.2 phr2 93..547 CDD:129679 88/446 (20%)
DNA_photolyase 117..278 CDD:279247 35/185 (19%)
Cry2NP_034093.1 PhrB 21..509 CDD:223492 85/436 (19%)
FAD_binding_7 306..504 CDD:377037 19/94 (20%)
Required for inhibition of CLOCK-ARNTL-mediated transcription. /evidence=ECO:0000250|UniProtKB:P97784 389..488 2/3 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 532..592
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0415
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.