DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phr and si:ch1073-390k14.1

DIOPT Version :9

Sequence 1:NP_523653.2 Gene:phr / 35735 FlyBaseID:FBgn0003082 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_009291670.1 Gene:si:ch1073-390k14.1 / 101883856 ZFINID:ZDB-GENE-141215-14 Length:813 Species:Danio rerio


Alignment Length:577 Identity:112/577 - (19%)
Similarity:198/577 - (34%) Gaps:147/577 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ESFKIVLPLQAMKRTKAQKAGPSKKAAKNEKASSEPKSDQESSDEEASTSKALLVSKPDYQNFEQ 74
            |..::.|.| ::..||  :..|..|...::.....|:|.:..:|....:|.|.....|:.|...:
Zfish    79 EELELALTL-SLYETK--QIDPEDKLHNSDHQHHVPRSYKTYADVRTESSGADGSVVPENQPTAK 140

  Fly    75 FLTHLE-HQRVCTAANIQEFSFRKKRVRVLSKTEDVKESSLG--GVVYWMSRDGRVQDNWALLFA 136
            .....| |:......:|......|.:.|.|.|.:.:.::..|  .||.|..||.|:.||.||:. 
Zfish   141 CTLDTEVHKTRNAIKHINGDKITKSQKRRLRKKQHLLKNPSGPRPVVLWFRRDLRMWDNPALIG- 204

  Fly   137 QRLALKLELPLTVVFCLVPKFL-NATIRH---YKFMMGGL------QEVEQQCRAL-DIPFHLLM 190
               .|:|..|      ::|.|| ||....   .....||.      |.:....|:| :...||:.
Zfish   205 ---CLELGAP------VIPVFLWNAMEEEGPGVTMSTGGASKYWLHQALVSLKRSLEERGSHLVT 260

  Fly   191 ----GSAVEKLPQFVKSKDIGAVVCDFAPLRLPRQWVEDVGKALPKSVPLVQVDAHNVVPLWVAS 251
                .|::..|...:......:||.    ..|...|:::...||.:::....|..| :...:...
Zfish   261 LKAEPSSLTALQGLMDETGAASVVA----TALYEPWLKERDDALWETLEKRGVTCH-IYHSYCLR 320

  Fly   252 DKQEYAARTIRNKINSKLGEYLSV--------------FPPVVRHPHG--TGC------------ 288
            |....:.|.:..:....:..::|.              .|..:..|..  .||            
Zfish   321 DPYTVSTRGVGLRGIGSVSHFMSCCQQNPAGGLGSPLDAPTTLPSPSAWPQGCPLADLGLARMPR 385

  Fly   289 -KNVNTVDWS------------AAYASLQCDMEVDEVQWAKPGYKAACQQLYEFCSRRLRHFNDK 340
             |:...:||:            .|:..|:..:.....::.|           |.|          
Zfish   386 RKDGTVIDWAVDIRKTWDFSEEGAHTHLEAFLRDGVYRYEK-----------ESC---------- 429

  Fly   341 RNDPTADA--LSGLSPWLHFGHISAQRCALEVQRFRGQHKASADAFCEEAIVRRELADNFCFYNE 403
                .|||  .|.|||:||||.:||::...          |:..|.|:....:|:||        
Zfish   430 ----RADAPNTSCLSPYLHFGQLSARQVLW----------AARGARCKSPKFQRKLA-------- 472

  Fly   404 HYDSLKGLSSWAYQTLDAHRKDKRDPCYS----------LEELEKSLTYDDLWNSAQLQLVREGK 458
                .:.|:.|..........:...|.|.          |:..::..|...|.::|..||.:.|.
Zfish   473 ----WRDLAYWQISLFPDLPWESLRPPYKALRWSSDHAHLKAWQRGRTGYPLVDAAMRQLWQTGW 533

  Fly   459 MHGFLRMYWAKKILEWTATP-EHALEY--AILLNDKYSLDGRDPNGYVGCMWSIGGV 512
            |:.::|...|..::.:...| :....:  ..|::...::|        ..||..||:
Zfish   534 MNNYMRHVVASFLIAYLHFPWQEGYRWFQDTLVDADVAID--------AMMWQNGGM 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phrNP_523653.2 phr2 93..547 CDD:129679 95/493 (19%)
DNA_photolyase 117..278 CDD:279247 38/189 (20%)
si:ch1073-390k14.1XP_009291670.1 PhrB 185..662 CDD:223492 90/468 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0415
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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