DRSC/TRiP Functional Genomics Resources

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Protein Alignment phr and cry1a

DIOPT Version :10

Sequence 1:NP_523653.2 Gene:phr / 35735 FlyBaseID:FBgn0003082 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001070765.2 Gene:cry1a / 100003956 ZFINID:ZDB-GENE-010426-2 Length:619 Species:Danio rerio


Alignment Length:405 Identity:82/405 - (20%)
Similarity:142/405 - (35%) Gaps:111/405 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 VYWMSRDGRVQDNWALLFAQRLALKLELPLTVVFCLVPKFL---NATIRHYKFMMGGLQEVEQQC 179
            |:|..:..|:.||.:|    |.::.....:..|:.|.|.|.   |..|..::|::..|::::...
Zfish     6 VHWFRKGLRLHDNPSL----RDSILGAHSVRCVYILDPWFAGSSNVGISRWRFLLQCLEDLDASL 66

  Fly   180 RALDIPFHLLMGSAVEKLPQFVKSKDIGAVVCDFAPLRLPRQWVEDVGK----ALPK-----SVP 235
            |.|:....::.|...:..|:..|..:|..:..::..        |..||    |:.|     .|.
Zfish    67 RKLNSRLFVIRGQPTDVFPRLFKEWNINRLSYEYDS--------EPFGKERDAAIKKLANEAGVE 123

  Fly   236 LVQVDAHNVVPLWVASDK-------------------------QEYAARTIRNKINSKLGEYLSV 275
            ::...:|.:..|    ||                         .|..|.||..::.......|| 
Zfish   124 VIVRISHTLYDL----DKIIELNGGQSPLTYKRFQTLISRMEAVETPAETITAEVMGPCTTPLS- 183

  Fly   276 FPPVVRHPHGTGCKNVNTVDWSAAYASLQCDME-VDEVQWAKPGYKA-ACQQLYEFCSRRLRHFN 338
                ..|....|..::.         .|..|.| :....|  ||.:. |..:|.....|:....|
Zfish   184 ----DDHDEKFGVPSLE---------ELGFDTEGLSSAVW--PGGETEALTRLERHLERKAWVAN 233

  Fly   339 DKRNDPTADAL----SGLSPWLHFGHISAQRCAL------EVQRFRGQHKASADAFCEEAIVRRE 393
            .:|....|::|    :||||:|.||.:|   |.|      ::.| :.:..:|........::.||
Zfish   234 FERPRMNANSLLASPTGLSPYLRFGCLS---CRLFYFKLTDLYR-KVKKNSSPPLSLYGQLLWRE 294

  Fly   394 LADNFCFYNEHYDSLKG---------------LSSWA-----YQTLDAHRKDKRDPCYSLEELEK 438
            ........|..:|.::|               |:.||     :..:||.....|...: :..|.:
Zfish   295 FFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGW-IHHLAR 358

  Fly   439 S-----LTYDDLWNS 448
            .     ||..|||.|
Zfish   359 HAVACFLTRGDLWIS 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phrNP_523653.2 phr2 93..547 CDD:129679 82/405 (20%)
cry1aNP_001070765.2 PhrB 5..487 CDD:440184 82/405 (20%)

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