DRSC/TRiP Functional Genomics Resources

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Protein Alignment puml and lid-1

DIOPT Version :9

Sequence 1:NP_001286169.1 Gene:puml / 35733 FlyBaseID:FBgn0033226 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001348662.1 Gene:lid-1 / 172888 WormBaseID:WBGene00007711 Length:365 Species:Caenorhabditis elegans


Alignment Length:365 Identity:138/365 - (37%)
Similarity:201/365 - (55%) Gaps:26/365 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LCNW---TSSSPTMLRAVEKKILSYVKLPYRGFFVDIGPAVGEADKIWTISMNTESKE----VPL 115
            :.||   |..|...|:.||.::....::.|...:|.:....||   ::|:::.....|    ..:
 Worm    13 IMNWMTFTDDSKEQLKIVEGRLFQSCEVSYEAKYVPVRFKRGE---VYTVTVRPREAENLNGEAI 74

  Fly   116 VLLHGLGAGIALWVMNLDAFAKGRPVYAMDILGFGRSSRPLFAKDALVCEKQFVKSVEEWRREMN 180
            |.:.|||||:|::..|.::.||...|::.|.||||||||..|:.|..:.|.:.|:.:|:||:.|.
 Worm    75 VFIPGLGAGVAMFTANFNSCAKNHAVHSFDPLGFGRSSRSRFSDDNAIAELEMVEVMEDWRKAMG 139

  Fly   181 INDMILLGHSMGGFIASSYALSHPERVKHLILADPWGFPEKPSDSTNGKT----IP-LWVRAIAR 240
            |..|.::||:.||::||:|||.:|.||.||||.|||||.||...:....|    .| .|:..:..
 Worm   140 IEKMYIIGHAFGGYLASAYALENPSRVAHLILVDPWGFAEKVETTEKLNTWLQIKPYAWMSFLGG 204

  Fly   241 VLTPLNPLWALRAAGPFGQWVVQKTRPDIMRKFQSTIEEDINLLPQYIHQCNAQNPSGESAFHTM 305
            |....||...:|..||:...:|:|.|||::.:|....:.||.   :|::..|..||:||:||..|
 Worm   205 VAGYFNPFSPMRWMGPYAPAIVKKLRPDLLLRFPGLHDYDIY---KYVYYLNLPNPTGETAFMNM 266

  Fly   306 MQSFGWAKHPMIHRIKDVRSDIPITFIYGSRSWIDSSSGEKIKSQRGSNMVDIKIVTGAGHHVYA 370
            ....||||.|||.|...:..::.::|||||:||||......|:|.|.:..||||||.|||.||||
 Worm   267 TLPVGWAKRPMIKRFNGIDKNVGVSFIYGSKSWIDPGPAIDIQSTRENAYVDIKIVRGAGTHVYA 331

  Fly   371 DKPDVFNRYVNETCDMYKVAGGKLITPLQ--LIRESTESD 408
            |.|..||..|::      |..|:|..|..  .|.|...||
 Worm   332 DDPAAFNEIVSD------VVEGRLSNPSNDFEIEECCHSD 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pumlNP_001286169.1 MhpC 114..382 CDD:223669 117/272 (43%)
Abhydrolase_5 114..>226 CDD:289465 53/111 (48%)
lid-1NP_001348662.1 PLN02894 <58..360 CDD:215484 124/310 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4409
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 243 1.000 Inparanoid score I2079
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57834
OrthoDB 1 1.010 - - D1555935at2759
OrthoFinder 1 1.000 - - FOG0001034
OrthoInspector 1 1.000 - - otm14343
orthoMCL 1 0.900 - - OOG6_101137
Panther 1 1.100 - - LDO PTHR42886
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R207
SonicParanoid 1 1.000 - - X562
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.870

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