DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sax and Bmpr1a

DIOPT Version :9

Sequence 1:NP_001246193.1 Gene:sax / 35731 FlyBaseID:FBgn0003317 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_110476.1 Gene:Bmpr1a / 81507 RGDID:70989 Length:532 Species:Rattus norvegicus


Alignment Length:574 Identity:230/574 - (40%)
Similarity:314/574 - (54%) Gaps:104/574 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 AHLNGKELPAV--------------PQNSVQTHPRRHIKSKRRMKRRYKCYSCEPPCRDPYEFTH 94
            :|:.|:.|.::              |:|.|...|...:..       .||| |...|.|. ...:
  Rat    19 SHVQGQNLDSMLHGTGMKSDVDQKKPENGVTLAPEDTLPF-------LKCY-CSGHCPDD-AINN 74

  Fly    95 TCQNAIQCWKSRTRDADGQVQESRGCSTSPDQLPMICSQNSLKING----------PSKRNTGKF 149
            ||.....|:.....|..|:...:.||               :|..|          ...|.|   
  Rat    75 TCITNGHCFAIIEEDDQGETTLTSGC---------------MKYEGSDFQCKDSPKAQLRRT--- 121

  Fly   150 VNVVCCAGDYCNEGDFPELLPFDSNDVTVITADTSSISKMLVAVLGPF-------LVIALLGAVT 207
              :.||..:.||:...|.|.|                     .|:|||       |.:.:..||.
  Rat   122 --IECCRTNLCNQYLQPTLPP---------------------VVIGPFFDGSVRWLAVLISMAVC 163

  Fly   208 IF--------FIRRSHRKRLAA----SRTKQDPEAYLVNDELLRATSAGDSTLREYLQHSVTSGS 260
            |.        |..:.:.|.:::    :|..:..||::         ..|:| |::.:..|.:|||
  Rat   164 IVAMIVFSSCFCYKHYCKSISSRGRYNRDLEQDEAFI---------PVGES-LKDLIDQSQSSGS 218

  Fly   261 GSGLPLLVQRTLAKQVTLIECIGRGKYGEVWRGHWHGESIAVKIFFSRDEESWKRETEIYSTILL 325
            |||||||||||:|||:.::..:|:|:|||||.|.|.||.:|||:||:.:|.||.||||||.|:|:
  Rat   219 GSGLPLLVQRTIAKQIQMVRQVGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLM 283

  Fly   326 RHENILGFIGSDMTSRNSCTQLWLMTHYYPLGSLFDHLNRNALSHNDMVWICLSIANGLVHLHTE 390
            |||||||||.:|:....|.|||:|:|.|:..|||:|.|....|....::.:..|.|.||.|||||
  Rat   284 RHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDFLKCATLDTRALLKLAYSAACGLCHLHTE 348

  Fly   391 IFGKQGKPAMAHRDLKSKNILVTSNGSCVIADFGLAVTHSHVTGQLDLGNNPKVGTKRYMAPEVL 455
            |:|.|||||:|||||||||||:..||||.|||.||||..:..|.::|:..|.:|||:||||||||
  Rat   349 IYGTQGKPAIAHRDLKSKNILIKKNGSCCIADLGLAVKFNSDTNEVDIPLNTRVGTRRYMAPEVL 413

  Fly   456 DESIDLECFEALRRTDIYAFGLVLWEVCRRTISCGIAEEYKVPFYDVVPMDPSFEDMRKVVCIDN 520
            |||:....|:.....|||:|||::||:.||.|:.||.|||::|:|::||.|||:||||:|||:..
  Rat   414 DESLSKNHFQPYIMADIYSFGLIIWEMARRCITGGIVEEYQLPYYNMVPSDPSYEDMREVVCVKR 478

  Fly   521 YRPSIPNRWSSDSLMTGMSKLMKECWHQNPDVRLPALRIKKTIHKLA-SADEKI 573
            .||.:.|||:||..:..:.|||.|||..||..||.|||||||:.|:. |.|.||
  Rat   479 LRPIVSNRWNSDECLRAVLKLMSECWAHNPASRLTALRIKKTLAKMVESQDVKI 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saxNP_001246193.1 Activin_recp 77..168 CDD:279413 22/100 (22%)
TM_EGFR-like 182..218 CDD:213052 9/50 (18%)
TGF_beta_GS 247..274 CDD:285687 16/26 (62%)
STKc_ACVR1_ALK1 270..567 CDD:271044 166/296 (56%)
TyrKc 276..553 CDD:197581 151/276 (55%)
Bmpr1aNP_110476.1 Activin_recp 59..138 CDD:279413 22/100 (22%)
Mediates specificity for BMP ligand. /evidence=ECO:0000250 107..109 0/1 (0%)
S_TKc 235..519 CDD:214567 157/283 (55%)
STKc_BMPR1a 238..524 CDD:271122 160/285 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D338017at33208
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X151
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.