DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sax and acvr1bb

DIOPT Version :10

Sequence 1:NP_001246193.1 Gene:sax / 35731 FlyBaseID:FBgn0003317 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_687633.5 Gene:acvr1bb / 559222 ZFINID:ZDB-GENE-131120-9 Length:498 Species:Danio rerio


Alignment Length:521 Identity:233/521 - (44%)
Similarity:303/521 - (58%) Gaps:71/521 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 CYSCEPPC-RDPYEFTHTCQNAIQCWKSRTRDADGQVQESRGC----STSPDQLPMICSQNSLKI 138
            |....|.| ||.::    |:....|..| |...:||.|..|.|    ...|...|..|    |..
Zfish    25 CNCTAPHCERDGFK----CETNGACVAS-TSVIEGQEQHVRLCIHKEKLVPPGQPFYC----LSA 80

  Fly   139 NGPSKRNTGKFVNVVCCAGDYCNEGDFPELLPFDSN-----------DVTVITADTSSISKMLVA 192
            .|        .:|..||..||||..|.  .||..:|           ::|.:.|           
Zfish    81 EG--------LMNTHCCYTDYCN
SIDL--RLPIVTNGPGAGQDWGPVELTAVVA----------- 124

  Fly   193 VLGPFLVIALLGAVTIFFIRR-----SHRKRLAASRTKQDPEA---YLVNDELLRATSAGDSTLR 249
              ||..|:.:|..:.:|..:.     .||:||..    :||..   :|          |.|.||:
Zfish   125 --GPVFVLCVLVLLGLFLFQHHQRAYGHRQRLEV----EDPSTEHMFL----------AKDKTLQ 173

  Fly   250 EYLQHSVTSGSGSGLPLLVQRTLAKQVTLIECIGRGKYGEVWRGHWHGESIAVKIFFSRDEESWK 314
            :.:....||||||||||.||||:|:.:.|.|.||:|::||||||.|.|..:|||||.||:|.||.
Zfish   174 DLIYDLSTSGSGSGLPLFVQRTVARTIVLQEIIGKGRFGEVWRGKWRGGDVAVKIFSSREERSWF 238

  Fly   315 RETEIYSTILLRHENILGFIGSDMTSRNSCTQLWLMTHYYPLGSLFDHLNRNALSHNDMVWICLS 379
            ||.|||.||:||||||||||.:|.....:.|||||::.|:..|||||:|||.:::...|:.:.||
Zfish   239 REAEIYQTIMLRHENILGFIAADNKDNGTWTQLWLVSDYHENGSLFDYLNRYSVTIEGMIKLALS 303

  Fly   380 IANGLVHLHTEIFGKQGKPAMAHRDLKSKNILVTSNGSCVIADFGLAVTHSHVTGQLDLGNNPKV 444
            .|:||.|||.||.|.||||.:||||||||||||..|.:|.|||.||||.|..:|..:|:..|.:|
Zfish   304 AASGLAHLHMEILGTQGKPGIAHRDLKSKNILVKKNCTCAIADLGLAVRHESITDTIDIAPNQRV 368

  Fly   445 GTKRYMAPEVLDESIDLECFEALRRTDIYAFGLVLWEVCRRTISCGIAEEYKVPFYDVVPMDPSF 509
            |||||||||||:|||::..|::.:..||||.|||.||:.||..:.||.|||::|:||:||.|||.
Zfish   369 GTKRYMAPEVLEESINMRHFDSFKCADIYALGLVYWEIARRCNAGGIHEEYQLPYYDLVPSDPSI 433

  Fly   510 EDMRKVVCIDNYRPSIPNRWSSDSLMTGMSKLMKECWHQNPDVRLPALRIKKTIHKLASADEKIR 574
            |:||||||....||:|||.|.|...:..|.|:|:|||:.|...||.|||||||:.:| |.||.::
Zfish   434 EEMRKVVCDQRLRPNIPNWWQSYEALRVMGKIMRECWYANGAARLTALRIKKTLSQL-SVDEDLK 497

  Fly   575 L 575
            :
Zfish   498 I 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saxNP_001246193.1 TFP_LU_ECD_Sax 74..166 CDD:467129 27/91 (30%)
TM_EGFR-like 182..218 CDD:213052 7/40 (18%)
TGF_beta_GS 247..274 CDD:462503 16/26 (62%)
STKc_ACVR1_ALK1 270..567 CDD:271044 169/296 (57%)
acvr1bbXP_687633.5 TFP_LU_ECD_ALK4 22..95 CDD:467066 24/86 (28%)
GS 170..200 CDD:197743 17/29 (59%)
STKc_TGFbR1_ACVR1b_ACVR1c 204..491 CDD:271045 166/287 (58%)

Return to query results.
Submit another query.