DRSC/TRiP Functional Genomics Resources

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Protein Alignment sax and tgfbr1

DIOPT Version :9

Sequence 1:NP_001246193.1 Gene:sax / 35731 FlyBaseID:FBgn0003317 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_001015961.1 Gene:tgfbr1 / 548715 XenbaseID:XB-GENE-478587 Length:499 Species:Xenopus tropicalis


Alignment Length:464 Identity:215/464 - (46%)
Similarity:288/464 - (62%) Gaps:26/464 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 DGQVQESRGCSTS----PDQLPMICSQNSLKINGPSKRNTGKFVNVVCCAGDYCNEGDFPELLPF 171
            ||:|..:..|...    |...|.:|...|         ..|.:.||.||..|:||     :.||.
 Frog    54 DGKVTHNSLCIADSERVPRDRPFMCFSTS---------TNGIYHNVECCQTDFCN-----KKLPA 104

  Fly   172 DSNDVTVITADTSSISKMLVAVLGPFLVIALLGAVTIFFIRRSHRKRLAASRTKQDPEAYLVNDE 236
            .|...:..........::...:.||..::.:|..:.::.   .|.:.:...|...|.:..|....
 Frog   105 PSTSPSPRPPTNLGPVELAAVIAGPVCLVCILLMLVLYI---CHNRTVIHHRVPNDEDPSLDRPF 166

  Fly   237 LLRATSAGDSTLREYLQHSVTSGSGSGLPLLVQRTLAKQVTLIECIGRGKYGEVWRGHWHGESIA 301
            :...|     ||::.:....|||||||||||||||:|:.:.|.|.||:|::||||||.|.||.:|
 Frog   167 ISEGT-----TLKDLIYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVA 226

  Fly   302 VKIFFSRDEESWKRETEIYSTILLRHENILGFIGSDMTSRNSCTQLWLMTHYYPLGSLFDHLNRN 366
            ||||.||:|.||.||.|||.|::||||||||||.:|.....:.|||||::.|:..|||||:|||.
 Frog   227 VKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY 291

  Fly   367 ALSHNDMVWICLSIANGLVHLHTEIFGKQGKPAMAHRDLKSKNILVTSNGSCVIADFGLAVTHSH 431
            .::...|:.:.||.|:||.|||.||.|.|||||:||||||||||||..||:|.|||.||||.|..
 Frog   292 TVTVEGMLKLSLSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 356

  Fly   432 VTGQLDLGNNPKVGTKRYMAPEVLDESIDLECFEALRRTDIYAFGLVLWEVCRRTISCGIAEEYK 496
            .|..:|:..|.:|||||||||||||:||:::.||:.:|.||||.|||.||:.||....||.|:|:
 Frog   357 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 421

  Fly   497 VPFYDVVPMDPSFEDMRKVVCIDNYRPSIPNRWSSDSLMTGMSKLMKECWHQNPDVRLPALRIKK 561
            :|:||:||.|||.|:|:||||....||:|||||.|...:..|:|:|:|||:.|...||.||||||
 Frog   422 LPYYDLVPSDPSVEEMKKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 486

  Fly   562 TIHKLASAD 570
            |:.:|:..:
 Frog   487 TLSQLSQQE 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saxNP_001246193.1 Activin_recp 77..168 CDD:279413 16/60 (27%)
TM_EGFR-like 182..218 CDD:213052 4/35 (11%)
TGF_beta_GS 247..274 CDD:285687 17/26 (65%)
STKc_ACVR1_ALK1 270..567 CDD:271044 172/296 (58%)
TyrKc 276..553 CDD:197581 160/276 (58%)
tgfbr1NP_001015961.1 Activin_recp 28..102 CDD:366445 16/61 (26%)
TGF_beta_GS 172..199 CDD:369918 17/26 (65%)
STKc_TGFbR1_ACVR1b_ACVR1c 205..492 CDD:271045 168/286 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D338017at33208
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X151
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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