DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sax and Amhr2

DIOPT Version :10

Sequence 1:NP_001246193.1 Gene:sax / 35731 FlyBaseID:FBgn0003317 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_112260.1 Gene:Amhr2 / 29530 RGDID:70964 Length:557 Species:Rattus norvegicus


Alignment Length:522 Identity:141/522 - (27%)
Similarity:232/522 - (44%) Gaps:91/522 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 FTHTCQNAIQCWKSRTRDADGQVQ-ESRGC--STSPDQLPMICSQNSLKINGPSKRNTGKFVNVV 153
            ::|.|   ...|..    ..|:.| |.:||  |..|....:.|  :.:....||..:|   :...
  Rat    57 YSHCC---FGIWNL----THGRAQVEMQGCLDSDEPGCESLHC--DPVPRAHPSPSST---LFTC 109

  Fly   154 CCAGDYCNEGDFPELLPFDSNDV---TVITADTSSISKMLVAVLGPFLVIALLGAVTIFFIRRSH 215
            .|..|:|| .::..|.|..:...   ....|.......|...:||.|||: ||..:.:..::|. 
  Rat   110 SCGTDFCN-ANYS
HLPPSGNRGAPGPQEPQATPGGPIWMAQLLLGVFLVL-LLSIIILALLQRK- 171

  Fly   216 RKRLAASRTK--QDPEAYLVNDELLRATSAGDSTLREYLQHSVTSGSGSGLPLLVQRTLAKQVTL 278
                 |.|.:  .|||.        ...|.||.:              ..||.|.      ::..
  Rat   172 -----ACRVQGGSDPEP--------EPGSGGDCS--------------EELPELA------ELRF 203

  Fly   279 IECIGRGKYGEVWRGHWHGESIAVKIFFSRDEESWKRETEIYSTILLRHENILGFIGSDMTSRNS 343
            .:.|..|.:..||.|...||.:|:|.|..|....::.|..:|..:.|:|.:|:.||.:.......
  Rat   204 SQVIQEGGHAVVWAGRLQGEMVAIKAFPPRAVAQFRAERAVYQLLGLQHNHIVRFITAGQGGPGP 268

  Fly   344 C-TQLWLMTHYYPLGSLFDHLNRNALSHNDMVWICLSIANGLVHLHTEIF-GKQGKPAMAHRDLK 406
            . :...|:...||.|||..:|.:........:.:.||:|.||..||.|.: ..|.||.:|||||.
  Rat   269 LPSGPLLVLELYPKGSLCHYLTQYTSDWGSSLRMALSLAEGLAFLHGERWQDGQYKPGIAHRDLS 333

  Fly   407 SKNILVTSNGSCVIADFGLAVTHSHVTGQLDLGNNP--------------KVGTKRYMAPEVLDE 457
            |:|:|:..:.||.|.|.|||:.   :.|   |...|              :.||:||||||:||:
  Rat   334 SQNVLIREDRSCAIGDLGLALV---LPG---LAQPPALAPTQPRGPAAILEAGTQRYMAPELLDK 392

  Fly   458 SIDLECF-EALRRTDIYAFGLVLWEVCRRTISCG-IAEEYKVPFYDV-----VPMDPSFEDMRKV 515
            ::||:.: .||:|.|:|:..|:|||:..|   |. :..:::.|.:.:     :..:||..::..:
  Rat   393 TLDLQDWGTALQRADVYSLALLLWEILSR---CSDLRPDHRPPPFQLAYEAELGSNPSACELWAL 454

  Fly   516 VCIDNYRPSIPNRWS-SDSLMTGMSKLMKECWHQNPDVRLPALRIKKTIHKLASADEKIRLDFDE 579
            ...:..||:||:.|| |.:...|:.:|:::||..:|:.||.|..:::.:..||.  .::...|.|
  Rat   455 AVAERKRPNIPSSWSCSATDPRGLRELLEDCWDADPEARLTAECVQQRLAALAY--PQVASSFPE 517

  Fly   580 VC 581
            .|
  Rat   518 SC 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saxNP_001246193.1 TFP_LU_ECD_Sax 74..166 CDD:467129 18/76 (24%)
TM_EGFR-like 182..218 CDD:213052 9/35 (26%)
TGF_beta_GS 247..274 CDD:462503 3/26 (12%)
STKc_ACVR1_ALK1 270..567 CDD:271044 95/320 (30%)
Amhr2NP_112260.1 TFP_LU_ECD_AMHR2 22..121 CDD:467136 18/76 (24%)
Protein Kinases, catalytic domain 205..506 CDD:473864 95/309 (31%)

Return to query results.
Submit another query.