DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sax and Acvr2b

DIOPT Version :10

Sequence 1:NP_001246193.1 Gene:sax / 35731 FlyBaseID:FBgn0003317 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_038936802.1 Gene:Acvr2b / 25366 RGDID:2028 Length:545 Species:Rattus norvegicus


Alignment Length:538 Identity:156/538 - (28%)
Similarity:259/538 - (48%) Gaps:96/538 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 QTHPRRHIKSKRRMKRRYKC--YSCEPPCRDPYEFTHTCQNAIQ-----------CWKSRTRDAD 111
            |.||:   .|.|......:|  |:..      :|...|.|:.::           |:.| .|::.
  Rat    22 QPHPK---GSGRGEAETRECIYYNAN------WELERTNQSGLERCEGEQDKRLHCYAS-WRNSS 76

  Fly   112 GQVQ-ESRGCSTSP----DQLPMICSQNSLKINGPSKRNTGKFVNVVCCAGDYCNEGDFPELLPF 171
            |.:: ..:||....    |:...:.::.:.:            |...||.|::||| .|..|...
  Rat    77 GTIELVKKGCWLDDFNCYDRQECVATEENPQ------------VYFCCCEGNFCNE-RFTHLPEP 128

  Fly   172 DSNDVTVITADTSSISKMLVAV----LGPFLVIALLGAVTIFFIRRSHRKRLAASRTKQDPEAYL 232
            ...:||.....|:.....::|.    :|...:|.||.    |::.| |||         .|..::
  Rat   129 GGPEVTYEPPPTAPTLLTVLAYSLLPIGGLSLIVLLA----FWMYR-HRK---------PPYGHV 179

  Fly   233 VNDELLRATSAGDSTLREYLQHSVTSGSGSGLPLLVQRTLA----------KQVTLIECIGRGKY 287
            ...|:.:....|..          ..|......||:.:...          |.:.|:|...||::
  Rat   180 DIHEVRQCQRGGGG----------RDGCADSFKLLLFQDPGPPPPSPLVGLKPLQLLEIKARGRF 234

  Fly   288 GEVWRGHWHGESIAVKIFFSRDEESWKRETEIYSTILLRHENILGFIGSDMTSRNSCTQLWLMTH 352
            |.||:.....:.:|||||..:|::||:.|.||:||..::|||:|.||.::....|...:|||:|.
  Rat   235 GCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITA 299

  Fly   353 YYPLGSLFDHLNRNALSHNDMVWICLSIANGLVHLHTEI---FGKQGKPAMAHRDLKSKNILVTS 414
            ::..|||.|:|..|.::.|::..:..:::.||.:||.::   .|:..||::||||.||||:|:.|
  Rat   300 FHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKS 364

  Fly   415 NGSCVIADFGLAVTHSHVTGQLDLGNNP-----KVGTKRYMAPEVLDESIDLECFEALRRTDIYA 474
            :.:.|:|||||||       :.:.|..|     :|||:||||||||:.:|:.: .:|..|.|:||
  Rat   365 DLTAVLADFGLAV-------RFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQ-RDAFLRIDMYA 421

  Fly   475 FGLVLWE-VCRRTISCGIAEEYKVPFYDVVPMDPSFEDMRKVVCIDNYRPSIPNRWSSDSLMTGM 538
            .|||||| |.|...:.|..:||.:||.:.:...||.|::::||.....||:|.:.|.....:..:
  Rat   422 MGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQL 486

  Fly   539 SKLMKECWHQNPDVRLPA 556
            ...::|||..:.:.||.|
  Rat   487 CVTIEECWDHDAEARLSA 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saxNP_001246193.1 TFP_LU_ECD_Sax 74..166 CDD:467129 19/109 (17%)
TM_EGFR-like 182..218 CDD:213052 10/39 (26%)
TGF_beta_GS 247..274 CDD:462503 3/36 (8%)
STKc_ACVR1_ALK1 270..567 CDD:271044 111/306 (36%)
Acvr2bXP_038936802.1 TFP_LU_ECD_ACVR2B 35..125 CDD:467152 20/109 (18%)
STKc_ACVR2b 227..517 CDD:271042 109/286 (38%)

Return to query results.
Submit another query.