DRSC/TRiP Functional Genomics Resources

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Protein Alignment sax and acvr1c

DIOPT Version :9

Sequence 1:NP_001246193.1 Gene:sax / 35731 FlyBaseID:FBgn0003317 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_002933316.2 Gene:acvr1c / 100487548 XenbaseID:XB-GENE-487108 Length:537 Species:Xenopus tropicalis


Alignment Length:502 Identity:220/502 - (43%)
Similarity:301/502 - (59%) Gaps:50/502 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 CYSCEPPCRDPYEFTHTCQNAIQCWKSRTRDADGQVQESRGCSTSPD-QLPMIC-SQNSLKINGP 141
            |..||       ...:|||....||.| .....|:.:..:.|.:.|: :..:.| |.|::     
 Frog    74 CLLCE-------NTNYTCQTEGACWTS-VMLTHGKEEVLKSCISLPEFKAQVFCHSSNNI----- 125

  Fly   142 SKRNTGKFVNVVCCAGDYCNEGD--FPELLPFDSN----DVTVITADTSSISKMLVAVLGPFLVI 200
                    ....||..|:||...  .|.:.|..|:    ::|||.  |.||..:.|.::      
 Frog   126 --------TRTECCLSDFCNNI
TLRLPAVTPGVSHMGHVELTVIV--TVSICLLSVVIM------ 174

  Fly   201 ALLGAVTIFFIRRSH-RKRLAASRTKQDPEAYLVNDELLRATSAGDSTLREYLQHSVTSGSGSGL 264
                 ||.:..:..: .|..|..:..::|......|      .||.| |::.:....||||||||
 Frog   175 -----VTAYVCQERYCAKNKARRQCVEEPLTECPLD------IAGKS-LKDLIYDMTTSGSGSGL 227

  Fly   265 PLLVQRTLAKQVTLIECIGRGKYGEVWRGHWHGESIAVKIFFSRDEESWKRETEIYSTILLRHEN 329
            |||||||:|:.|.:.|.:|:|::||||||.|.||.:|||||.||||.||.||.|||.|::|||||
 Frog   228 PLLVQRTIARTVVIQELVGKGRFGEVWRGKWCGEDVAVKIFSSRDERSWFREAEIYQTVMLRHEN 292

  Fly   330 ILGFIGSDMTSRNSCTQLWLMTHYYPLGSLFDHLNRNALSHNDMVWICLSIANGLVHLHTEIFGK 394
            |||||.:|.....:.|||||::.::..|||||:||.|.::...|:.:.||:.:||.|||.||.|.
 Frog   293 ILGFIAADNKDNGTWTQLWLISEFHEQGSLFDYLNCNTVTIGGMMKLALSVVSGLAHLHMEIVGT 357

  Fly   395 QGKPAMAHRDLKSKNILVTSNGSCVIADFGLAVTHSHVTGQLDLGNNPKVGTKRYMAPEVLDESI 459
            |||||:||||||||||||..|.:|.|||.||||.|..:|..:|:..||:||||||||||:||:||
 Frog   358 QGKPAIAHRDLKSKNILVKKNETCCIADLGLAVKHDSITNTIDIPQNPRVGTKRYMAPELLDDSI 422

  Fly   460 DLECFEALRRTDIYAFGLVLWEVCRRTISCGIAEEYKVPFYDVVPMDPSFEDMRKVVCIDNYRPS 524
            :...|::.:.:|||:.|||.||:.||....|:.:||::|:||:||.|||.||:|||||....|||
 Frog   423 NTYHFDSFKCSDIYSLGLVYWEIARRCSVGGVVDEYQLPYYDMVPSDPSLEDVRKVVCEQKLRPS 487

  Fly   525 IPNRWSSDSLMTGMSKLMKECWHQNPDVRLPALRIKKTIHKLASADE 571
            |||:|.|...:..|.::|:|||:.|...||.||||||||.:|...::
 Frog   488 IPNQWQSFEALRIMGRIMRECWYANGKARLTALRIKKTISQLCVEED 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saxNP_001246193.1 Activin_recp 77..168 CDD:279413 21/92 (23%)
TM_EGFR-like 182..218 CDD:213052 6/36 (17%)
TGF_beta_GS 247..274 CDD:285687 16/26 (62%)
STKc_ACVR1_ALK1 270..567 CDD:271044 166/296 (56%)
TyrKc 276..553 CDD:197581 153/276 (55%)
acvr1cXP_002933316.2 Activin_recp 70..139 CDD:366445 20/85 (24%)
TGF_beta_GS 210..237 CDD:369918 17/27 (63%)
STKc_TGFbR1_ACVR1b_ACVR1c 243..530 CDD:271045 162/286 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D338017at33208
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X151
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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