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Protein Alignment Gapdh1 and gapdhs

DIOPT Version :9

Sequence 1:	NP_001033936.1	Gene:	Gapdh1 / 35728	FlyBaseID:	FBgn0001091	Length:	332	Species:	Drosophila melanogaster
Sequence 2:	NP_998259.1	Gene:	gapdhs / 406367	ZFINID:	ZDB-GENE-020913-1	Length:	335	Species:	Danio rerio

Alignment Length:	330	Identity:	239/330 - (72%)
Similarity:	273/330 - (82%)	Gaps:	1/330 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 IGINGFGRIGRLVLRAAIDKGASVVAVNDPFIDVNYMVYLFKFDSTHGRFKGTVAAEGGFLVVNG 68
            :|||||||||||||||.:.||..|.|:||||||:.||||:||:||||||:||.|..|.|.|:|:|
Zfish     6 VGINGFGRIGRLVLRACLQKGIKVTAINDPFIDLQYMVYMFKYDSTHGRYKGEVHMEDGKLIVDG 70

  Fly    69 QKITVFSERDPANINWASAGAEYVVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVCGVN 133
            |.|:||....||.|.|..|||.|||||||||.:|:|||.|::||||:|::||||.||||||.|||
Zfish    71 QAISVFQCMKPAEIPWGDAGALYVVESTGVFLSIEKASAHIQGGAKRVVVSAPSPDAPMFVMGVN 135

  Fly   134 LDAYSP-DMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGR 197
            .|.|.| .|.:||||||||||||||||||:|||.|.|.|||||||.|||||||||||.|.|||||
Zfish   136 QDKYDPSSMTIVSNASCTTNCLAPLAKVIHDNFGIEEALMTTVHAYTATQKTVDGPSAKAWRDGR 200

  Fly   198 GAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGATYDEIKAKVEEA 262
            ||.||||||:||||||||||||.|||||||||||||..:|||||||.||.:.|:|..||..|::|
Zfish   201 GAHQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPVADVSVVDLTCRLTRPASYANIKESVKKA 265

  Fly   263 SKGPLKGILGYTDEEVVSTDFFSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDLIKY 327
            :.||:|||||||::.|||:||..|||||:|||.|||||||.|||||||||||||||:||.||:.|
Zfish   266 AHGPMKGILGYTEDSVVSSDFVGDTHSSIFDAGAGISLNDNFVKLISWYDNEFGYSHRVADLLMY 330

  Fly   328 MQSKD 332
            |.||:
Zfish   331 MHSKE 335

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.