DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gapdh1 and CG9010

DIOPT Version :9

Sequence 1:NP_001033936.1 Gene:Gapdh1 / 35728 FlyBaseID:FBgn0001091 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_611172.1 Gene:CG9010 / 36904 FlyBaseID:FBgn0034173 Length:343 Species:Drosophila melanogaster


Alignment Length:333 Identity:217/333 - (65%)
Similarity:252/333 - (75%) Gaps:1/333 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKIGINGFGRIGRLVLR-AAIDKGASVVAVNDPFIDVNYMVYLFKFDSTHGRFKGTVAAEGGFL 64
            ||.|||||||||||:..| |.:.|...:||:|||.:|..|:.|:.::|||||:|...::.:|..|
  Fly     1 MSGIGINGFGRIGRMFARQALVRKDVKIVAINDPSLDPKYLAYMLRYDSTHGQFNQKISVDGNNL 65

  Fly    65 VVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFV 129
            ||||:||.:..|.|...|.|...|...|||.:|.|||:.....||..|||||:||||||||||||
  Fly    66 VVNGKKIQLLKESDVKKIKWCDLGVHTVVECSGRFTTLKACQGHLDSGAKKVVISAPSADAPMFV 130

  Fly   130 CGVNLDAYSPDMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWR 194
            |||||:||.|...::||||||||||||||||::|||||.|||||||||.|||||.:||||.||||
  Fly   131 CGVNLEAYKPGTAIISNASCTTNCLAPLAKVVHDNFEICEGLMTTVHAATATQKIIDGPSSKLWR 195

  Fly   195 DGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGATYDEIKAKV 259
            |||....|||||:||||||||||||.|||||||||||||.|||||||||.||.|.|..|:||..:
  Fly   196 DGRSGMTNIIPASTGAAKAVGKVIPDLNGKLTGMAFRVPVPNVSVVDLTCRLSKPAKMDDIKKCI 260

  Fly   260 EEASKGPLKGILGYTDEEVVSTDFFSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDL 324
            :.|||..:||||||.:||||||||.....:|||||||.|:|||.|||||||||||.|||.|::||
  Fly   261 KAASKCEMKGILGYVEEEVVSTDFNGSRFASVFDAKACIALNDNFVKLISWYDNETGYSCRLLDL 325

  Fly   325 IKYMQSKD 332
            :.|.|..|
  Fly   326 VLYAQLVD 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gapdh1NP_001033936.1 GapA 1..332 CDD:223135 216/331 (65%)
Gp_dh_N 3..149 CDD:278473 78/146 (53%)
Gp_dh_C 154..311 CDD:280894 117/156 (75%)
CG9010NP_611172.1 GapA 4..331 CDD:223135 213/326 (65%)
Gp_dh_N 4..150 CDD:278473 78/145 (54%)
Gp_dh_C 155..312 CDD:280894 117/156 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471695
Domainoid 1 1.000 77 1.000 Domainoid score I5730
eggNOG 1 0.900 - - E1_COG0057
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394372at33208
OrthoFinder 1 1.000 - - FOG0000254
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100218
Panther 1 1.100 - - P PTHR10836
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.750

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