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Protein Alignment Gapdh1 and Pnma8b
DIOPT Version :10
| Sequence 1: | NP_525108.2 |
Gene: | Gapdh1 / 35728 |
FlyBaseID: | FBgn0001091 |
Length: | 332 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001100951.1 |
Gene: | Pnma8b / 308393 |
RGDID: | 1560435 |
Length: | 667 |
Species: | Rattus norvegicus |
| Alignment Length: | 82 |
Identity: | 18/82 - (21%) |
| Similarity: | 36/82 - (43%) |
Gaps: | 15/82 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 256 KAKVEEASKGPLKGILGYTDE-----EVVSTDFFSDTHSSVFDAKAGISLNDKFVKLISWYDNEF 315
:.|||||.:.....:|...:| |.:|| .::..:.....|:|:.| |..| ...
Rat 411 RVKVEEAGRQVDAMVLRKAEEDGNLLECIST--LAEAENCPKGKKSGLGL------LRGW--TAE 465
Fly 316 GYSNRVIDLIKYMQSKD 332
|:...:::|:..:.::|
Rat 466 GHQGGLLELVALLAAQD 482
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Gapdh1 | NP_525108.2 |
PLN02272 |
<2..328 |
CDD:177912 |
17/76 (22%) |
| Pnma8b | NP_001100951.1 |
PNMA |
1..>114 |
CDD:464357 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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