DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gapdh1 and LOC1278999

DIOPT Version :10

Sequence 1:NP_525108.2 Gene:Gapdh1 / 35728 FlyBaseID:FBgn0001091 Length:332 Species:Drosophila melanogaster
Sequence 2:XP_318655.2 Gene:LOC1278999 / 1278999 VectorBaseID:AGAMI1_010649 Length:332 Species:Anopheles gambiae


Alignment Length:332 Identity:285/332 - (85%)
Similarity:304/332 - (91%) Gaps:0/332 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKIGINGFGRIGRLVLRAAIDKGASVVAVNDPFIDVNYMVYLFKFDSTHGRFKGTVAAEGGFLV 65
            |||||||||||||||||||||.|||||||:|||||.|:|||||||:|||||||||.|:|:.|.||
Mosquito     1 MSKIGINGFGRIGRLVLRAAITKGASVVAINDPFIGVDYMVYLFKYDSTHGRFKGEVSAQDGCLV 65

  Fly    66 VNGQKITVFSERDPANINWASAGAEYVVESTGVFTTIDKASTHLKGGAKKVIISAPSADAPMFVC 130
            ||||||.||.||||..|.|..|||||||||||||||.:|||.||:|||||||||||||||||||.
Mosquito    66 VNGQKIAVFQERDPKAIPWGKAGAEYVVESTGVFTTTEKASAHLEGGAKKVIISAPSADAPMFVV 130

  Fly   131 GVNLDAYSPDMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRD 195
            ||||:||.|.|||||||||||||||||||||||||.|:|||||||||||||||||||||||||||
Mosquito   131 GVNLEAYEPSMKVVSNASCTTNCLAPLAKVINDNFGILEGLMTTVHATTATQKTVDGPSGKLWRD 195

  Fly   196 GRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGATYDEIKAKVE 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||.|.||||:||.||:
Mosquito   196 GRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLSKPATYDQIKQKVK 260

  Fly   261 EASKGPLKGILGYTDEEVVSTDFFSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDLI 325
            ||:.||:||||.||:||||||||..|.|||:|||||||.|:|.|||||||||||:||||||:|||
Mosquito   261 EAANGPMKGILDYTEEEVVSTDFVGDCHSSIFDAKAGIQLSDTFVKLISWYDNEYGYSNRVVDLI 325

  Fly   326 KYMQSKD 332
            ||||:||
Mosquito   326 KYMQTKD 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gapdh1NP_525108.2 PLN02272 <2..328 CDD:177912 279/325 (86%)
LOC1278999XP_318655.2 PLN02272 <2..328 CDD:177912 279/325 (86%)

Return to query results.
Submit another query.