DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cn and Kmo

DIOPT Version :9

Sequence 1:NP_523651.4 Gene:cn / 35724 FlyBaseID:FBgn0000337 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_598570.1 Gene:Kmo / 98256 MGIID:2138151 Length:479 Species:Mus musculus


Alignment Length:435 Identity:199/435 - (45%)
Similarity:279/435 - (64%) Gaps:7/435 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RRVAVIGAGLVGSLAALNFARMGNHVDLYEYREDIRQALVVQGRSINLALSQRGRKALAAVGLEQ 93
            :||||||.||||:|.|...|:....||:||.|||||.|...:|||||||||.|||:||.|:|||.
Mouse     9 KRVAVIGGGLVGALNACFLAKRNFQVDVYEAREDIRVAKSARGRSINLALSYRGRQALKAIGLED 73

  Fly    94 EVLATAIPMRGRMLHDVRGNSSVVLYDPINNQCLYSVGRRQLNEVLLNACDKLPNIRCHFEHKLT 158
            ::::..:||:.||:|.:.|..|.:.|.. .:|.:.|:.|..||:.||.|.:...|.:.||.|||:
Mouse    74 QIVSKGVPMKARMIHSLSGKKSAIPYGN-KSQYILSISRENLNKDLLTAVESYANAKVHFGHKLS 137

  Fly   159 SANLREGSMEFRNPAKEAVAAHADLIVGCDGAFSSVRQNNVRLPGFNYSQEYIETGYLELCIPSK 223
            .....||.:....|.|.......||:||||||:|:||.:.::.|.|:|:|:||..||:||.||.|
Mouse   138 KCIPEEGVLTVLGPDKVPRDVTCDLVVGCDGAYSTVRAHLMKKPRFDYTQQYIPHGYMELTIPPK 202

  Fly   224 SGDFQMPANYLHIWPRNTFMMIALPNQDKSFTVTLSMPFEIFAGIQNQNDLLEFFKLNFRDALPL 288
            :|::.|..|.|||||||.:|||||||.|||||.||.||||.|..:..::|:|:||:.||.||:||
Mouse   203 NGEYAMEPNCLHIWPRNAYMMIALPNMDKSFTCTLFMPFEEFERLPTRSDVLDFFQKNFPDAIPL 267

  Fly   289 IGEQQLIKDFFKTRPQFLVSIKCRPYHYADKALILGDAAHAMVPYYGQGMNAGMEDVTLLTDILA 353
            :|||.|::|||....|.::|:||.|:|.....:::||||||:||::|||||||.||..:..:::.
Mouse   268 MGEQALMRDFFLLPAQPMISVKCSPFHLKSHCVLMGDAAHAIVPFFGQGMNAGFEDCLVFDELMD 332

  Fly   354 K-QLPLDETLALFTESRWQDAFAICDLAMYNYVEMR-DLTKRWTFRLRKWLDTLLFRLFPG-WIP 415
            | ...|...|..|:..|..|..||.||:||||:||| .:..|| |..:|.||..|..:.|. :||
Mouse   333 KFNNNLSMCLPEFSRFRIPDDHAISDLSMYNYIEMRAHVNSRW-FLFQKLLDKFLHAIMPSTFIP 396

  Fly   416 LYNSVSFSSMPYRQCIANRKWQDQLLKRIFGATFLAAIVTGGAIY 460
            ||..|:|:.:.|.:.:....||.:::.|  |...|.:::..|..|
Mouse   397 LYTMVAFTRIRYHEAVLRWHWQKKVINR--GLFVLGSLIAIGGTY 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cnNP_523651.4 UbiH 31..411 CDD:223727 183/381 (48%)
NADB_Rossmann 31..353 CDD:304358 159/321 (50%)
KmoNP_598570.1 UbiH 10..361 CDD:223727 170/351 (48%)
NADB_Rossmann 11..330 CDD:304358 159/319 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 324 1.000 Domainoid score I1200
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2729
Inparanoid 1 1.050 379 1.000 Inparanoid score I2046
Isobase 1 0.950 - 0 Normalized mean entropy S1210
OMA 1 1.010 - - QHG55558
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003209
OrthoInspector 1 1.000 - - oto93905
orthoMCL 1 0.900 - - OOG6_103174
Panther 1 1.100 - - LDO PTHR46028
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2172
SonicParanoid 1 1.000 - - X4199
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.950

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