DRSC/TRiP Functional Genomics Resources

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Protein Alignment cn and SQP2

DIOPT Version :9

Sequence 1:NP_523651.4 Gene:cn / 35724 FlyBaseID:FBgn0000337 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_197802.2 Gene:SQP2 / 832479 AraportID:AT5G24140 Length:518 Species:Arabidopsis thaliana


Alignment Length:360 Identity:89/360 - (24%)
Similarity:149/360 - (41%) Gaps:46/360 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EAARDERHGRRRRVAVIGAGLVGSLAALNFARMGNHVDLYEYREDIRQALVVQGRSINLALSQRG 82
            ||..:.|......|.::|||:.|:..|...|:.|..|.:.|  .|:::.....|.    .:...|
plant    35 EAEAEARRDGATDVIIVGAGVAGASLAYALAKDGRRVHVIE--RDLKEPQRFMGE----LMQAGG 93

  Fly    83 RKALAAVGLE--------QEVLATAIPMRGRMLHDVRGNSSVVLYDPINNQCLYSVGRRQLNEVL 139
            |..||.:|||        ||..:.||...|:.......:.....::|:..  |...||  |.:.|
plant    94 RFMLAQLGLEDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGR--LLRNGR--LVQRL 154

  Fly   140 LNACDKLPNIRCHFEHKLTSANLREG---SMEFRNPAKEAVAAHADLIVGCDGAFSSVRQNNVRL 201
            ......|.|::.. |..:.|....||   .:.::|.|.|.:.|.|.|.|.|||.:|::|::.|  
plant   155 RQKAASLSNVQLE-EGTVKSLIEEEGVVKGVTYKNSAGEEITAFAPLTVVCDGCYSNLRRSLV-- 216

  Fly   202 PGFNYSQEYIE--TGYLELCIPSKSGDFQMPANYLHIWPRNTFMMIALPNQDKSFTVTLSMPFEI 264
               :.::|.:.  .||:     :|:...:.|.:...|:.:....:|.....|:...|. .:|.:.
plant   217 ---DNTEEVLSYMVGYV-----TKNSRLEDPHSLHLIFSKPLVCVIYQITSDEVRCVA-EVPADS 272

  Fly   265 FAGIQNQNDLLEFFKLNFRDALPLIGEQQLIKDFFKTRPQFLVSI-----KCRPYHYADK--ALI 322
            ...|.| .::..|.|.:....:|..|..:.|  |.|...:.|..|     |.......||  .::
plant   273 IPSISN-GEMSTFLKKSMAPQIPETGNLREI--FLKGIEEGLPEIKSTATKSMSSRLCDKRGVIV 334

  Fly   323 LGDAAHAMVPYYGQGMNAGMEDVTLLTDILAKQLP 357
            ||||.:...|....||...:.|:.:|.::| |.||
plant   335 LGDAFNMRHPIIASGMMVALSDICILRNLL-KPLP 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cnNP_523651.4 UbiH 31..411 CDD:223727 86/347 (25%)
NADB_Rossmann 31..353 CDD:304358 82/341 (24%)
SQP2NP_197802.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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