DRSC/TRiP Functional Genomics Resources

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Protein Alignment cn and AT5G05320

DIOPT Version :9

Sequence 1:NP_523651.4 Gene:cn / 35724 FlyBaseID:FBgn0000337 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_196151.1 Gene:AT5G05320 / 830414 AraportID:AT5G05320 Length:406 Species:Arabidopsis thaliana


Alignment Length:440 Identity:97/440 - (22%)
Similarity:160/440 - (36%) Gaps:103/440 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VAVIGAGLVGSLAALNFARMGNHVDLYEYREDIRQALVVQGRSINLALSQRGRKALAAVGLEQEV 95
            :.::|||:.|...||...|:|....:.|..|.:|      .....|:|.....||:.|:|:.|.:
plant     9 IIIVGAGISGLATALGLHRLGIRSIVLESSEQLR------ATGFALSLYFNAWKAMEALGISQHI 67

  Fly    96 LATAIPMRGRMLHDV-RGNSSVVLYDPINNQCLYSVGRRQLNEVLLNA-CDKLPNIRCHFEHKLT 158
            .:.....:|.::..: .|:....:..|.:.:  |.| |....::||:| ..:||.....|..||.
plant    68 RSLGDRFQGWVVRPISAGDPPKEMLFPESEE--YEV-RCVQRKLLLDALAGELPQGTIRFSSKLV 129

  Fly   159 SANLREGSMEFRNPAKEAVAAHADLIVGCDGAFS----------SVRQNNVRLPGFNYSQEYIET 213
            ...| .|..:..: ..:.......::|||||..|          .|:.:.|.:.|..:.|...|.
plant   130 HIEL-SGHYKMVH-LSDGTILKTKVLVGCDGVKSVVGKWLGFKNPVKTSRVAIRGIAHFQTGHEL 192

  Fly   214 G--YLELCIPS-KSGDFQMPANYLHIWPRNTFMMIALPNQDKSFTVTLSMPFEIFAGIQNQNDLL 275
            |  :.:..... :||......|.:: |    |:.....:.||                :|...:.
plant   193 GRRFFQFYGNGVRSGFISCDQNTVY-W----FLTHTSTDLDK----------------KNHQKIK 236

  Fly   276 EFFKLNFRDALPLIGEQQLIKDFFKTRPQFLVSIKCRPYHY------------ADKALILGDAAH 328
            :|.....:| ||     ..||...:|..  |.|:...|..|            .|...:.|||.|
plant   237 QFVLTKIKD-LP-----DNIKSILETTD--LDSLVMNPLMYRPPWELLWANIAKDNVCVAGDALH 293

  Fly   329 AMVPYYGQGMNAGMEDVTLLTDILAKQLP-----------------LDETLALFTESR-WQDAFA 375
            .|.|..|||..:.|||..:|...|.:.:.                 :::.|..:..|| |:.   
plant   294 PMTPDIGQGGCSAMEDGVILARCLGEAMKAKNMKGETEDENESYRRIEDGLKKYAGSRKWRS--- 355

  Fly   376 ICDLAMYNYVEMRDLTKRWTFRLR-KWLDTLLFR-----LFPGWIPLYNS 419
             .||...:|      |..:..:.| ||:  .|||     .|..|:.:..|
plant   356 -IDLITTSY------TVGFIQQSRGKWM--TLFRDKFMSSFLSWLRVKKS 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cnNP_523651.4 UbiH 31..411 CDD:223727 94/430 (22%)
NADB_Rossmann 31..353 CDD:304358 79/348 (23%)
AT5G05320NP_196151.1 UbiH 6..381 CDD:223727 93/423 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 51 1.000 Domainoid score I4322
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2577
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

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