DRSC/TRiP Functional Genomics Resources

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Protein Alignment cn and COQ6

DIOPT Version :9

Sequence 1:NP_523651.4 Gene:cn / 35724 FlyBaseID:FBgn0000337 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_872282.1 Gene:COQ6 / 51004 HGNCID:20233 Length:468 Species:Homo sapiens


Alignment Length:437 Identity:89/437 - (20%)
Similarity:159/437 - (36%) Gaps:116/437 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VAVIGAGLVGSLAALNFARMGNHVDLYEYREDIRQALVVQG--RSINLALSQRGRKALAAVGLEQ 93
            |.|.|.||||:..|   ..:|..:..::     ::.|:::.  :.:...||:.....::::....
Human    38 VVVSGGGLVGAAMA---CALGYDIHFHD-----KKILLLEAGPKKVLEKLSETYSNRVSSISPGS 94

  Fly    94 EVLATAI-------PMRGRMLHDVR----GNSSVVLYDPINNQCLYSVGRRQLNEVLLNACDK-- 145
            ..|.::.       .||.|....::    .:.:::::|..|   |..:|....|:|:::|..|  
Human    95 ATLLSSFGAWDHICNMRYRAFRRMQVWDACSEALIMFDKDN---LDDMGYIVENDVIMHALTKQL 156

  Fly   146 ------------LPNIR----CHFEHKLTS----ANLREGSMEFRNPAKEAVAAHADLIVGCDGA 190
                        ...||    |.|....:|    ..|.:||           .....|::|.||.
Human   157 EAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGS-----------TFQTKLLIGADGH 210

  Fly   191 FSSVRQ----NNVRLPGFNYSQEYIETGYLELCIPSKSG-DFQ--MPANYLHIWP-RNTFMMIAL 247
            .|.|||    .||   .:||.|..: ...|.|...:::. .:|  :|:..:.:.| .:|...:..
Human   211 NSGVRQAVGIQNV---SWNYDQSAV-VATLHLSEATENNVAWQRFLPSGPIALLPLSDTLSSLVW 271

  Fly   248 PNQDKSFTVTLSMPFEIF----------------------AGIQNQNDLLEFFKLNFRDALPLIG 290
            ....:.....:||..|.|                      |.:|....||:..|::.|...|.:.
Human   272 STSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLKPTKVSARQLPPSVA 336

  Fly   291 EQQLIKDFFKTRPQFLVSIKCRPYHYADKALILGDAAHAMVPYYGQGMNAGMEDVTLLTDILAKQ 355
            ....     |:|..|.:.:.....:...:..::|||||.:.|..|||:|.|..|::.|...|   
Human   337 RVDA-----KSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMGFGDISSLAHHL--- 393

  Fly   356 LPLDETLALFTESRWQDAFAICDLAMYNYVEMR---------DLTKR 393
                 :.|.|   ..:|..::..|..|.....|         ||.||
Human   394 -----STAAF---NGKDLGSVSHLTGYETERQRHNTALLAATDLLKR 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cnNP_523651.4 UbiH 31..411 CDD:223727 89/437 (20%)
NADB_Rossmann 31..353 CDD:304358 78/386 (20%)
COQ6NP_872282.1 Ubi-OHases 48..467 CDD:273913 82/427 (19%)
COQ6 48..463 CDD:273914 82/427 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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