DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cn and kmo-2

DIOPT Version :9

Sequence 1:NP_523651.4 Gene:cn / 35724 FlyBaseID:FBgn0000337 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001129902.1 Gene:kmo-2 / 187655 WormBaseID:WBGene00011088 Length:445 Species:Caenorhabditis elegans


Alignment Length:442 Identity:135/442 - (30%)
Similarity:237/442 - (53%) Gaps:33/442 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VAVIGAGLVGSLAALNFARMGNHVDLYEYREDIRQALVVQGRSINLALSQRGRKALAAVGLEQEV 95
            |.:.|.|||||..|..|.:.|..||:||.|.|.|...:..|:||||||..|....:..:||:::|
 Worm     4 VVIAGGGLVGSANACFFGQKGWIVDVYESRFDPRGNHMENGKSINLALGVRAMSTMKRIGLKEKV 68

  Fly    96 LATAIPMRGRMLH--DVRGNSS--VVLYDPINNQCLYSVGRRQLNEVLLNACDKLPNIRCHFEHK 156
            :...:|:|.::.|  |.:|...  .||.|   :..:.::.|::|:::|:|..:|..|::.||..|
 Worm    69 IHIGVPIRDQIAHFGDTKGKLKRLPVLND---DDFILTINRQELSQILINEAEKYNNVKFHFNCK 130

  Fly   157 LTSANLREGSMEFRNPAKEAVAAHADLIVGCDGAFSSVRQNNVRLPGFNYSQEYIETGYLELCIP 221
            .|..:|:..|:..:| :........||.:.||||.||:|::.::.||||:||:|.|.||::|.:.
 Worm   131 ATKFDLKSESLIVQN-SDNLSTVDGDLFLACDGAHSSIRRSLLKAPGFNFSQKYSEFGYIDLSVN 194

  Fly   222 S-KSGDFQMPANYLHIWPRNTFMMIALPNQDKSFTVTLSMPFEIF-AGIQNQNDLLEFFKLNFRD 284
            | :..|.::..:|  .|.|...:::|:.|:|:|.||::...|..| :.:....:.:.|||.||.:
 Worm   195 STQQCDLKLGTHY--SWRRRGIILVAIVNKDQSLTVSMFATFSEFESNLVGPVESVLFFKNNFYE 257

  Fly   285 ALPLIGEQQLIKDFFKTRPQFLVSIKCRPYHYADKALILGDAAHAMVPYYGQGMNAGMEDVTLLT 349
            ...::||..:.....:.:||.::|::|..:.:.||.:::|||||||||:.|||:|.|.||..:|.
 Worm   258 IFKILGEDHIRNTIARNKPQAIISVQCSQHVFFDKLVLMGDAAHAMVPFNGQGVNCGFEDCLVLQ 322

  Fly   350 DIL--AKQLPLDETLALFTESRWQDAFAICDLAMYNYVEM---RDLTKR------WTFRLRKWLD 403
            :|:  .::..|::.:..:::.|..:...|      |.:|.   ..||..      |...:|..:.
 Worm   323 EIMDQYEEDELEDVIKEYSKVRTNETNII------NQMEWDVNLTLTSSVHGSLGWIREIRAHIK 381

  Fly   404 TLLFRLFPGWIPLYNSVSFSSMPYRQCIANRKWQDQLLKRIFGATFLAAIVT 455
            .||..:||....|   .:||...|.: ||.:....:....:|...|:..|::
 Worm   382 LLLCFIFPSSFTL---AAFSREKYSE-IARKAQIVEKCTSLFTNVFIVFIIS 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cnNP_523651.4 UbiH 31..411 CDD:223727 124/396 (31%)
NADB_Rossmann 31..353 CDD:304358 113/329 (34%)
kmo-2NP_001129902.1 UbiH 1..344 CDD:223727 114/345 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1210
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D268134at33208
OrthoFinder 1 1.000 - - FOG0003209
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46028
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4199
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.970

Return to query results.
Submit another query.