DRSC/TRiP Functional Genomics Resources

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Protein Alignment cn and kmo-1

DIOPT Version :10

Sequence 1:NP_523651.4 Gene:cn / 35724 FlyBaseID:FBgn0000337 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_506025.1 Gene:kmo-1 / 179657 WormBaseID:WBGene00011089 Length:461 Species:Caenorhabditis elegans


Alignment Length:457 Identity:194/457 - (42%)
Similarity:287/457 - (62%) Gaps:28/457 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 VAVIGAGLVGSLAALNFARMGNHVDLYEYREDIRQALVVQGRSINLALSQRGRKALAAVGLEQEV 95
            ||:.||||||:|.|..||:.|..|.:||:|:|||....||||||||||||||:.||.||||::.:
 Worm     4 VAIAGAGLVGALNACFFAQKGWDVSVYEFRKDIRTMKHVQGRSINLALSQRGKSALEAVGLKEYI 68

  Fly    96 LATAIPMRGRMLHDVRGNSSVVLY--DPIN--NQCLYSVGRRQLNEVLLNACDKLPNIRCHFEHK 156
            :...:|:..|::|:..|.:    |  .|..  .:.:.|:.||.||||::...:|.||::..||||
 Worm    69 VNQGVPLYARLIHNKDGKT----YSRQPYGKPGEHIVSINRRHLNEVMITQAEKSPNVKFFFEHK 129

  Fly   157 L--------------TSANLREGSMEFRNPAKEAVAAH--ADLIVGCDGAFSSVRQNNVRLPGFN 205
            :              ||...:..:...::|.:|....|  ||||:.||||:|:||::.:.:|.|:
 Worm   130 VKNVDYDKKQLVVQCTSQPSKIPTFGNKSPPQEHAEFHVEADLILACDGAYSAVRRSLMTIPRFD 194

  Fly   206 YSQEYIETGYLELCIPSKSGDFQMPANYLHIWPRNTFMMIALPNQDKSFTVTLSMPFEIF-AGIQ 269
            :||||||.||:||.|.:.:.:|....|..|:|||..|.:|||.|:||:||||:..||..| ..:.
 Worm   195 FSQEYIEHGYVELNIMANNNEFAFEENVFHLWPRGHFTLIALANRDKTFTVTIFAPFSEFEKHMS 259

  Fly   270 NQNDLLEFFKLNFRDALPLIGEQQLIKDFFKTRPQFLVSIKCRPYHYADKALILGDAAHAMVPYY 334
            ...|:|.||:.||.||..|:|::.:...|.:.:||.||||||.|:.:.|..:::|||||||||:|
 Worm   260 TSEDVLSFFEENFPDAFLLLGKEHIADTFNRVKPQPLVSIKCSPHSFFDNLVLMGDAAHAMVPFY 324

  Fly   335 GQGMNAGMEDVTLLTDILAKQ-LPLDETLALFTESRWQDAFAICDLAMYNYVEMRDLTKRWTFRL 398
            |||||.|.||..:.::.|.:. ..:.:.:.::::.|..||.:|.|||||||.|::||..:.:::|
 Worm   325 GQGMNCGFEDCLVFSETLEEYGNDIAKAVKVYSDGRVNDAHSINDLAMYNYEELKDLVNKSSYKL 389

  Fly   399 RKWLDTLLFRLFP-GWIPLYNSVSFSSMPYRQCIANRKWQDQLLKRIFGATFLAAIVTGGA-IYA 461
            ||..||::..:|| .|||||:.|:||.:||.:.|..||.||::|.||...|...|::...| ||.
 Worm   390 RKKFDTIMNSIFPKSWIPLYSMVTFSRIPYSEVIERRKRQDKILSRIMTTTSTLALIGAAAGIYV 454

  Fly   462 QR 463
            .|
 Worm   455 NR 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cnNP_523651.4 UbiH 31..417 CDD:440419 173/408 (42%)
kmo-1NP_506025.1 UbiH 1..376 CDD:440419 159/375 (42%)

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