DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1941 and agap3

DIOPT Version :9

Sequence 1:NP_001286161.1 Gene:CG1941 / 35718 FlyBaseID:FBgn0033214 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_031759480.1 Gene:agap3 / 101735127 -ID:- Length:1039 Species:Xenopus tropicalis


Alignment Length:195 Identity:41/195 - (21%)
Similarity:70/195 - (35%) Gaps:51/195 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 RSWGLVSVSK-----EALVYLLTKSNDPKHKDNRDGFT-------SNAVAILVGGAQEALDSHPG 214
            :.:|.::.|:     |.::..:.::.....:|.:|.|.       |.:|..|..|....|.|  |
 Frog   241 KEYGTMNPSRTGRTTEPVLIGMMRAESRARRDLKDSFVNSQEWTLSRSVPELKVGIVGNLSS--G 303

  Fly   215 KYILTLKNRKG------------FVKMAIRTGSSIVPTFSFGEVDILDQVANPPNSRVRRFQDFV 267
            |..|..:...|            |.|..:..|.|.:       :.|.|: ..||..:...:.|.|
 Frog   304 KSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYL-------LLIRDE-GGPPEMQFAAWVDAV 360

  Fly   268 KRITGISPLIPVGRGIFNYSFGFLPNRRRIVQV----VGAPIDVVQSDQPDAAYVDKIHKQVIDD 328
            ..:..:...|.. :.:||| :..|.:.|....|    ||.. |.:.:..|          :||||
 Frog   361 VFVFSLEDEISF-QTVFNY-YARLSSYRNTADVPMVLVGTQ-DAISATNP----------RVIDD 412

  Fly   329  328
             Frog   413  412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1941NP_001286161.1 LPLAT 50..340 CDD:302626 41/195 (21%)
agap3XP_031759480.1 Centaurin_gamma 292..449 CDD:133303 33/144 (23%)
PH_AGAP 564..791 CDD:241281
ArfGap_AGAP 809..916 CDD:350065
Ank_2 935..1025 CDD:403870
ANK repeat 935..965 CDD:293786
ANK repeat 967..998 CDD:293786
ANK repeat 1000..1025 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165166223
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.