DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tor and csf1rb

DIOPT Version :9

Sequence 1:NP_476762.1 Gene:tor / 35717 FlyBaseID:FBgn0003733 Length:923 Species:Drosophila melanogaster
Sequence 2:XP_009293978.1 Gene:csf1rb / 568405 ZFINID:ZDB-GENE-091118-1 Length:961 Species:Danio rerio


Alignment Length:1008 Identity:225/1008 - (22%)
Similarity:376/1008 - (37%) Gaps:316/1008 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SCLKDCRI-------------NGTF--PG-----------ALRKVQENYQMNMICRTE------S 87
            |.|.||.:             ||:.  ||           .:..:|.:|..:.:|...      .
Zfish   125 SFLLDCLLTNPAGTEFSLQMTNGSAVPPGMNYTADPRRGILIPNLQPSYTGDYVCMVNMSGVQWK 189

  Fly    88 EIVFQIDWVQHSRGTEPAPNATYIIRVDAVKDDNKETALYLSDDN-------------------- 132
            ..||||..::  :..||...:...::...:..::.:...|:.:.|                    
Zfish   190 SKVFQITVIK--KAQEPPSVSLPALQYVRIVGESLQIPCYIQNHNHYYNFTWSSPKKVLNFEREI 252

  Fly   133 -------------FLILPGLESNSTHNITALAMHGDGSYS------LIAKDQTFATLIRGYQPSK 178
                         :|....|:.:.|.|:|..||:..|..|      ::.|.....|.|...: .|
Zfish   253 KKKKKCEQVCATIYLTFQQLKMSDTENLTCTAMNEAGRNSSTAVLRVVEKPYLELTPILSSE-YK 316

  Fly   179 MGAVNLLRFVPQPDDLH---HIAA--EIEWKPSAESNCYFDMVSYSTNSVNMDEPLEVQFRDRKK 238
            ....|::|.  ..|.|.   ||.|  ::||            ..:.|.|.|..            
Zfish   317 GNETNVVRM--HGDQLELGVHIQAYPDVEW------------AKWKTPSSNHS------------ 355

  Fly   239 LYRHTVDNLEFDKQYHVGVR---------------------------TVNIMNRLESDLQWLPIA 276
             |..|...:.....|...:|                           ||::..:..:.::| ...
Zfish   356 -YEETFHKIHDSDIYMATIRLKNVGAQDYGDYIFSAGSTSVNASIIFTVHVYQKPTTVIKW-ENG 418

  Fly   277 VPSC---------LDWYPY--NYTLCPPHKPENLTVTQKQYLPNILALNITWARPRYLPDNYTLH 330
            |.||         :.|:.|  |..||                                .||.|  
Zfish   419 VVSCAATGYPIPSIQWFQYEVNRALC--------------------------------SDNRT-- 449

  Fly   331 IFDLFKGGTEL--NYTLDQNRSHF-------YVPKITVLGSHFEVHLVAQSAGGKNVS--GLTLD 384
                  .|.||  |.::.:....:       .:|:||. .:......||.:..|.:..  ..|..
Zfish   450 ------SGVELMANQSISEQSGEYEPVLVKSALPEITA-NADLIFECVATNTAGDDCDFYTFTFS 507

  Fly   385 KVHRGVLLSEGNMVKLVLFIIVPICCILMLCSLTFCRR-NRSEVQALQMDAKDAKASEFHLSLMD 448
            ......:.|...::.|.|...:.:..:.||..|...|: .:.|:|...::..|..    :.:.:|
Zfish   508 GPRPTSVWSTSVLISLGLSGALSVATLWMLILLYKNRKAQKYEIQWKIIEVNDGN----NYTFID 568

  Fly   449 SSGLLVTLSANESLEVMDELEVEPHSVLLQDVLGEGAFGLVRR----GVYKKR---QVAVKLLKD 506
            .|          .|....:||...:.:.|..|||.||||.|.:    |:.|..   :||||:||.
Zfish   569 PS----------QLPYNKKLEFPRNKLKLGQVLGAGAFGKVVQATAIGLVKDETITRVAVKMLKP 623

  Fly   507 EPNDEDVYAFKCEIQMLKAVGKHPNIVGIVGYSTRFSNQMMLLIEYCSLGSLQNFLREEWKFRQE 571
            ....|:..|...|:::|..:|.|.|||.::|..|: ...|:::.|||..|.|.||||:       
Zfish   624 SARFEEREALMSELKILNYIGPHENIVNLLGACTQ-GGPMLMITEYCCHGDLLNFLRQ------- 680

  Fly   572 QNAIGLKKNLEQNVDNRRFNRLPRNSIHDRIEDINNSMLSTVEEESESDQTHSSRCETYTLTRIT 636
                                         |:|...|::|..     :|....|:..:..|:.: .
Zfish   681 -----------------------------RVETFVNTVLGV-----QSFAEDSNLYKNVTIQK-Q 710

  Fly   637 NAADNKGYGLEDIENIGGSYIPKTAEAPKDRPKRKLKPQPKKDSKQDFKSDNKKRIFENKEYFDC 701
            :.|.|...||:..               :|.|..::..:|.::|                    |
Zfish   711 HPARNAYSGLDSF---------------RDTPSGQMPKEPFQES--------------------C 740

  Fly   702 LDSSDTKPRIPLKYADLLDIAQQVAVGMEFLAQNKVVHRDLAARNVLISVDRSIKIADFGLSRDV 766
              :.:.:..:.|...|||..:.|||.||:|||....:||||||||||::..|.:||.||||:||:
Zfish   741 --NEELENMLSLDNMDLLMFSYQVAQGMDFLASKNCIHRDLAARNVLVADCRIVKICDFGLARDI 803

  Fly   767 YHENVYRKSGGSGKLPIKWLALESLTHQVYTSQSDVWSFGVLLYEITTLGGMPYPSVS-PSDLLQ 830
            .::..|... |:.:||:||::.||:...:||.||||||:||||:||.:||..|||:|: .:...:
Zfish   804 MNDTNYVVK-GNARLPVKWMSPESIFECLYTVQSDVWSYGVLLWEIFSLGMSPYPNVAIDAQFYK 867

  Fly   831 LLRQGHRMKRPEGCTQEMFSLMESCWSSVPSHRPTFSALKHRLGGMI-LATND-----VPERLKQ 889
            :::.|:.|.:|:....||:::|:.||...|:.||||:.:...:..:: :.|::     .||..:.
Zfish   868 MIKDGYHMPQPDFAPHEMYTIMKMCWRQEPTTRPTFADITELIAKLLPMQTSEDNETMYPELRRH 932

  Fly   890 LQAATESKLKSCDGLNSKVEQVPCEEELYLEPL 922
            |.|      ..|:......:|...||   .:||
Zfish   933 LMA------NHCNTSPVCTDQAGSEE---AQPL 956

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
torNP_476762.1 FN3 199..261 CDD:214495 11/90 (12%)
STYKc 475..873 CDD:214568 126/405 (31%)
PTKc 479..873 CDD:270623 125/401 (31%)
csf1rbXP_009293978.1 Ig 34..92 CDD:299845
IG <49..103 CDD:214652
IG_like 116..197 CDD:214653 15/71 (21%)
Ig_2 118..197 CDD:290606 15/71 (21%)
IG_like 210..299 CDD:214653 11/88 (13%)
Ig 222..296 CDD:143165 11/73 (15%)
Ig 318..405 CDD:299845 18/113 (16%)
Ig 422..496 CDD:299845 18/114 (16%)
PKc_like 548..914 CDD:304357 134/460 (29%)
Pkinase_Tyr 585..910 CDD:285015 126/405 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.