DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tor and PDGFRA

DIOPT Version :9

Sequence 1:NP_476762.1 Gene:tor / 35717 FlyBaseID:FBgn0003733 Length:923 Species:Drosophila melanogaster
Sequence 2:NP_001334757.1 Gene:PDGFRA / 5156 HGNCID:8803 Length:1114 Species:Homo sapiens


Alignment Length:905 Identity:223/905 - (24%)
Similarity:356/905 - (39%) Gaps:259/905 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 LPGLESNSTHNITALAMHGDGSYSLIA----------KDQTFATLIRGY---QP--SKMGAVNLL 185
            :|.::...|..:....:...|.|...|          |..|.:...:|:   :|  |::.|||| 
Human   291 VPSIKLVYTLTVPEATVKDSGDYECAARQATREVKEMKKVTISVHEKGFIEIKPTFSQLEAVNL- 354

  Fly   186 RFVPQPDDLHHIAAEIEWKPSAESNCYFDMVSYSTNSVNMDEPL-----------EVQFRDRKKL 239
                  .::.|...|:...|...       :|:..|::.:.|.|           |:::|.:.||
Human   355 ------HEVKHFVVEVRAYPPPR-------ISWLKNNLTLIENLTEITTDVEKIQEIRYRSKLKL 406

  Fly   240 YR--------HTV--DNLEFDKQYHVGVRTVNIMNRLESDLQWLPIAVPSCLDWYPYNYTLCPPH 294
            .|        :|:  .|.:..|.|     |..::.::.|          |.||       |...|
Human   407 IRAKEEDSGHYTIVAQNEDAVKSY-----TFELLTQVPS----------SILD-------LVDDH 449

  Fly   295 KPENLTVTQKQYLPNILALNITWARPRYLPDNYTLHIFDLFKGGTELNYTLDQNRSHFYVPKITV 359
            .......|.:           ..|....|||...:...|:.|...|.::|:..|.    |..|..
Human   450 HGSTGGQTVR-----------CTAEGTPLPDIEWMICKDIKKCNNETSWTILANN----VSNIIT 499

  Fly   360 LGSHFEVHLVAQSAGGKNVSG-LTLDKVH---------RGVLLSEGNMVK--------------- 399
                 |:|    |.....|.| :|..||.         :.:|.:|...:|               
Human   500 -----EIH----SRDRSTVEGRVTFAKVEETIAVRCLAKNLLGAENRELKLVAPTLRSELTVAAA 555

  Fly   400 -LVLFIIVPICCILMLCSLTFCRRNRSEVQALQMDAKDAKASEF-HLSLMDSSGLLVTLSANESL 462
             |||.:||.|..|:::  :.:.::.|.|::...:::......|: ::..|             .|
Human   556 VLVLLVIVIISLIVLV--VIWKQKPRYEIRWRVIESISPDGHEYIYVDPM-------------QL 605

  Fly   463 EVMDELEVEPHSVLLQDVLGEGAFGLVRRGV-------YKKRQVAVKLLKDEPNDEDVYAFKCEI 520
            ......|.....::|..|||.||||.|..|.       ....:||||:||......:..|...|:
Human   606 PYDSRWEFPRDGLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSEL 670

  Fly   521 QMLKAVGKHPNIVGIVGYSTRFSNQMMLLIEYCSLGSLQNFLREEWKFRQEQNAIGLKKNLEQNV 585
            :::..:|.|.|||.::|..|: |..:.::.|||..|.|.|:|.:                     
Human   671 KIMTHLGPHLNIVNLLGACTK-SGPIYIITEYCFYGDLVNYLHK--------------------- 713

  Fly   586 DNRRFNRLPRNSIHDRIEDINNSMLSTVEEESESDQTHSSRCETYTLTRITNAAD--NKGYGLED 648
                 ||              :|.||...|:.:.:      .:.:.|    |.||  .:.|.:..
Human   714 -----NR--------------DSFLSHHPEKPKKE------LDIFGL----NPADESTRSYVILS 749

  Fly   649 IENIGGSYIPKTAEAPKDRPKRKLKPQPK----KDSKQDFKSDNKKRIFENKEYFDCLDSSDTKP 709
            .||.|.....|.|:..:..|..:.|...|    :.|..|..:..||:...:.|..:.|...::: 
Human   750 FENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDDNSE- 813

  Fly   710 RIPLKYADLLDIAQQVAVGMEFLAQNKVVHRDLAARNVLISVDRSIKIADFGLSRDVYHENVYRK 774
              .|...|||....|||.||||||....|||||||||||::..:.:||.||||:||:.|::.| .
Human   814 --GLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY-V 875

  Fly   775 SGGSGKLPIKWLALESLTHQVYTSQSDVWSFGVLLYEITTLGGMPYPSVS-PSDLLQLLRQGHRM 838
            |.||..||:||:|.||:...:||:.|||||:|:||:||.:|||.|||.:. .|.....::.|:||
Human   876 SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRM 940

  Fly   839 KRPEGCTQEMFSLMESCWSSVPSHRPTFSALKHRLGGMILATNDVPERLKQ-------------- 889
            .:|:..|.|::.:|..||:|.|..||:|..|..      :..|.:|.:.|:              
Human   941 AKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSE------IVENLLPGQYKKSYEKIHLDFLKSDH 999

  Fly   890 -----------------LQAATESKLKSCD-GLNSK--------------VEQVPCEEEL 917
                             .....|.|||..: ||:.:              ::.||.||:|
Human  1000 PAVARMRVDSDNAYIGVTYKNEEDKLKDWEGGLDEQRLSADSGYIIPLPDIDPVPEEEDL 1059

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
torNP_476762.1 FN3 199..261 CDD:214495 16/82 (20%)
STYKc 475..873 CDD:214568 136/411 (33%)
PTKc 479..873 CDD:270623 135/407 (33%)
PDGFRANP_001334757.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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