DRSC/TRiP Functional Genomics Resources

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Protein Alignment tor and Pdgfra

DIOPT Version :9

Sequence 1:NP_476762.1 Gene:tor / 35717 FlyBaseID:FBgn0003733 Length:923 Species:Drosophila melanogaster
Sequence 2:NP_036934.1 Gene:Pdgfra / 25267 RGDID:3284 Length:1088 Species:Rattus norvegicus


Alignment Length:1115 Identity:243/1115 - (21%)
Similarity:389/1115 - (34%) Gaps:409/1115 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 CRTESEIVFQIDWVQHSRGTEPAPNATYIIRVDAVKDDNKETALYLSDDNFLILPGLESNSTHNI 147
            |..|||    :.| ||....|..||.       .::.:...::|:::     :|..:.:::.|. 
  Rat    48 CFGESE----VSW-QHPMSEEEDPNV-------EIRTEENNSSLFVT-----VLEVVNASAAHT- 94

  Fly   148 TALAMHGDGSYSLIAK-DQTFATLIRGYQPSKMGAVNLLRFVPQPD------DLHHIAAEIEWKP 205
                    |.|:.... .||        :.|::...::..:||.||      .:......:|...
  Rat    95 --------GWYTCYYNHTQT--------EESEIEGRHIYIYVPDPDMAFVPLGMTDSLVIVEEDD 143

  Fly   206 SAESNCYFDMVSYSTNSVNMDEPLEVQFRDRKKLYRHTVD------------------------- 245
            ||...|.           ..|...||...:..:|...:.|                         
  Rat   144 SAIIPCR-----------TTDPDTEVTLHNNGRLVPASYDSRQGFNGTFSVGPYICEATVRGRTF 197

  Fly   246 ----------------NLEFDKQ---YHVG---VRTVNIMNRLESDLQWL--------------P 274
                            |||.|.:   |..|   |.|..:.|....||||.              .
  Rat   198 KTSEFNVYALKATSELNLEMDTRQTVYKAGETIVVTCAVFNNEVVDLQWTYPGEVRNKGITMLEE 262

  Fly   275 IAVPSCLDWYPYNYTLCPPH-----------------------KPENLTVTQKQYLP------NI 310
            |.:||    ....|||..|.                       |...::|.:|.::.      ::
  Rat   263 IKLPS----IKLVYTLTVPKATVKDSGDYECAARQATKEVKEMKTVTISVHEKGFVQIRPTFGHL 323

  Fly   311 LALNITWAR-----------PR--YLPDNYTLHIFDLFKGGTELNYTLDQNRSHFYVPKITVL-- 360
            ..:|:...|           ||  :|.||.|     |.:..||:...:.:::...|..|:.::  
  Rat   324 ETVNLHQVREFVVEVQAYPTPRISWLKDNLT-----LIENLTEITTDVQRSQETRYQSKLKLIRA 383

  Fly   361 ----GSHFEV------------------------HLVAQ---SAGGK------------------ 376
                ..|:.:                        .||..   |.||:                  
  Rat   384 KEEDSGHYTIIVQNDDDMKSYTFELSTLVPASILELVDDHHGSGGGQTVRCTAEGTPLPNIEWMI 448

  Fly   377 ------------------NVSGLTLDKVHRG---------------------------------- 389
                              |||.:..:...||                                  
  Rat   449 CKDIKKCNNDTSWTVLASNVSNIITEFHQRGRSTVEGRVSFAKVEETIAVRCLAKNDLGIGNREL 513

  Fly   390 -----VLLSEGNMVKLVLFIIVPICCILMLCSLTFCRRNRSEVQALQMDAKDAKASEF-HLSLMD 448
                 .|.||..:...||.::|.:...|::..:.:.::.|.|::...:::......|: ::..| 
  Rat   514 KLVAPTLRSELTVAAAVLVLLVIVIVSLIVLVVIWKQKPRYEIRWRVIESISPDGHEYIYVDPM- 577

  Fly   449 SSGLLVTLSANESLEVMDELEVEPHSVLLQDVLGEGAFGLVRRGV-------YKKRQVAVKLLKD 506
                        .|......|.....::|..:||.||||.|..|.       ....:||||:||.
  Rat   578 ------------QLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKP 630

  Fly   507 EPNDEDVYAFKCEIQMLKAVGKHPNIVGIVGYSTRFSNQMMLLIEYCSLGSLQNFLREEWKFRQE 571
            .....:..|...|::::..:|.|.|||.::|..|: |..:.::.|||..|.|.|:|.:       
  Rat   631 TARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-SGPIYIITEYCFYGDLVNYLHK------- 687

  Fly   572 QNAIGLKKNLEQNVDNRRFNRLPRNSIHDRIEDINNSMLSTVEEESESDQTHSSRCETYTLTRIT 636
                               ||              :|.:|...|:.:.|      .:.:.|    
  Rat   688 -------------------NR--------------DSFMSRHPEKPKKD------LDIFGL---- 709

  Fly   637 NAAD--NKGYGLEDIENIGGSYIP-KTAEAPKDRPKRKLKPQPK----KDSKQDFKSDNKKRIFE 694
            |.||  .:.|.:...|| .|.|:. |.|:..:..|..:.|...|    :.|..|..:..||:...
  Rat   710 NPADESTRSYVILSFEN-NGDYVDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSML 773

  Fly   695 NKEYFDCLDSSDTKPRIPLKYADLLDIAQQVAVGMEFLAQNKVVHRDLAARNVLISVDRSIKIAD 759
            :.|..:.|...|::   .|...|||....|||.||||||....|||||||||||::..:.:||.|
  Rat   774 DSEAKNLLSDDDSE---GLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICD 835

  Fly   760 FGLSRDVYHENVYRKSGGSGKLPIKWLALESLTHQVYTSQSDVWSFGVLLYEITTLGGMPYPSVS 824
            |||:||:.|::.| .|.||..||:||:|.||:...:||:.|||||:||||:||.:|||.|||.:.
  Rat   836 FGLARDIMHDSNY-VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGVLLWEIFSLGGTPYPGMM 899

  Fly   825 -PSDLLQLLRQGHRMKRPEGCTQEMFSLMESCWSSVPSHRPTFSALKHRLGGMILATNDVPERLK 888
             .|.....::.|:||.:|:..|.|::.:|..||:|.|..||:|..|..      :..|.:|.:.|
  Rat   900 VDSTFYNKIKSGYRMAKPDHATSEVYEIMVQCWNSEPEKRPSFYHLSE------IVENLLPGQYK 958

  Fly   889 Q-------------------------------LQAATESKLKSCD-GLNSK-------------- 907
            :                               .....|.|||..: ||:.:              
  Rat   959 KSYEKIHLDFLKSDHPAVARMRVDSDNAYIGVTYKNEEDKLKEWEGGLDEQRLSADSGYIIPLPD 1023

  Fly   908 VEQVPCEEEL 917
            ::.||.||:|
  Rat  1024 IDPVPEEEDL 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
torNP_476762.1 FN3 199..261 CDD:214495 17/108 (16%)
STYKc 475..873 CDD:214568 138/412 (33%)
PTKc 479..873 CDD:270623 137/408 (34%)
PdgfraNP_036934.1 Ig_3 27..99 CDD:404760 15/76 (20%)
Ig 211..309 CDD:416386 21/101 (21%)
Ig strand A 211..215 CDD:409353 0/3 (0%)
Ig strand A' 222..226 CDD:409353 1/3 (33%)
Ig strand B 228..237 CDD:409353 2/8 (25%)
Ig strand C 242..247 CDD:409353 3/4 (75%)
Ig strand C' 250..252 CDD:409353 0/1 (0%)
Ig strand D 256..264 CDD:409353 0/7 (0%)
Ig strand E 268..276 CDD:409353 3/7 (43%)
Ig strand F 286..292 CDD:409353 0/5 (0%)
Ig strand G 297..303 CDD:409353 0/5 (0%)
Ig4_PDGFR 312..412 CDD:409445 14/104 (13%)
Ig strand B 332..336 CDD:409445 1/3 (33%)
Ig strand C 345..349 CDD:409445 1/3 (33%)
Ig strand E 376..380 CDD:409445 1/3 (33%)
Ig strand F 390..395 CDD:409445 1/4 (25%)
Ig strand G 403..406 CDD:409445 0/2 (0%)
PTKc_PDGFR_alpha 554..955 CDD:173653 144/475 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1017..1088 5/17 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24416
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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