DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tor and ver-4

DIOPT Version :9

Sequence 1:NP_476762.1 Gene:tor / 35717 FlyBaseID:FBgn0003733 Length:923 Species:Drosophila melanogaster
Sequence 2:NP_509835.2 Gene:ver-4 / 186632 WormBaseID:WBGene00006897 Length:1216 Species:Caenorhabditis elegans


Alignment Length:887 Identity:206/887 - (23%)
Similarity:333/887 - (37%) Gaps:291/887 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 EIVFQIDWVQHSRGTEPAPNATYIIRVDAVKDDNKETALYLSDDNFLILPGLESNSTHNITALAM 152
            :||.|:.|:......|  |||...||          ..|.|:..|.|.||   .|:..:|..||:
 Worm   467 DIVQQVKWIIEVENDE--PNAQLTIR----------DPLTLNISNQLFLP---LNTNLSIFCLAV 516

  Fly   153 HGDGSYSLIAKDQTFATLIRGYQPSKMGAVN-------LLRFVPQPDDLHHIAAEIEWK------ 204
            ....:..:...........||:..:|:..::       :..||        :|...::|      
 Worm   517 SSSPTDVIFEYRTDENEWFRGFYKNKLRKIDDTFEKGFIYNFV--------LAKRTDFKCINVKK 573

  Fly   205 ---------PSAESNCYFDMVSYSTNSVNMDEPLEVQFRDRKKLYRHTVDNLEFDKQYHVGVRTV 260
                     .::.:|..|..:..|.|:.. .||.::.|..         ||        |.:..|
 Worm   574 KKTSTKFITVTSNANKTFHEIEKSVNATK-TEPSDIIFEG---------DN--------VRLTCV 620

  Fly   261 NIMNRLESDLQWLPIAVPSCLDWYPYNYTLCPPHKP------------ENLT----------VTQ 303
            .....:|.|:.| ....|..|     .||..|...|            .|:|          |..
 Worm   621 VPYGAVEFDVFW-KFENPKML-----KYTTFPAMHPVKDRYKRVILNVRNITIDFTGTYYCIVKN 679

  Fly   304 KQYLPNI-LALNITWARPRYLPDNYTLHI--------FDL--------------FKGGTELNYTL 345
            |::.... .::::....|.:|.:|.:..|        ||:              ||.|  ..|| 
 Worm   680 KEFEHRFETSISVEKVSPPFLLNNNSRSIISASNGQMFDINCKVNGVPTPDYTWFKDG--YPYT- 741

  Fly   346 DQNRSHFYVPKITVLGSHFEVHLVAQSAGG------KNVSGLTLDKVHRGVLLSEGN-----MVK 399
                      |..|:|:...|....:...|      .|.:|.|:|.:...|..:..:     .:.
 Worm   742 ----------KGKVIGNALHVSKAEKRDNGIFWCSATNRAGTTIDYIEVKVAGASSSSFFWLFIT 796

  Fly   400 LVLFIIVPICCILMLCSLTFCRRNRSEVQALQMDAKDAKASEFHLSLMDS----------SGLLV 454
            ...|::|.| .:.:|..|              ...||.|.||..|:.:..          |..:.
 Worm   797 FFAFVVVGI-VVSLLWKL--------------FGQKDLKPSELSLNNLKRATDEYQKYTVSEKIN 846

  Fly   455 TLSANESLEVM---DELEVEPHSVLLQDVLGEGAFGLVRRGV----------YKKR-QVAVKLLK 505
            .|...|.::.:   ::.|::..::.:.:.||.|.||:|::|.          ::.| .||:|...
 Worm   847 NLPVEERIDYLTYNEDYEIDLENLEILETLGSGQFGIVKKGYLNMASSKNFGFESRLSVAIKSST 911

  Fly   506 DEPNDEDVYAFKCEIQMLKAVGKHPNIVGIVGYSTRFS--NQMMLLIEYCSLGSLQNFLREEWKF 568
            |..|.|....|..|::::.|:.||||::.:||..|:..  .::.::.|....|:|:.||||    
 Worm   912 DSSNMELQKMFFEELKLMCAIPKHPNVLSLVGAVTKNMEIGELFIVTELIDGGNLREFLRE---- 972

  Fly   569 RQEQNAIGLKKNLEQNVDNRRFNRLPRNSIHDRIEDINNSMLSTVEEESESDQTHSSRCETYTLT 633
                               ||              |:                            
 Worm   973 -------------------RR--------------DV---------------------------- 976

  Fly   634 RITNAADNKGY-GLEDI-ENIGGSYIPKTAEAPKDRPKRKLKPQPKKDSKQDFKSDNKKRIFENK 696
             ..|....||| .|.:: ||:               |||:::       |:....|.        
 Worm   977 -FANELVEKGYIFLTNVRENV---------------PKREVE-------KEQLLIDE-------- 1010

  Fly   697 EYFDCLDSSDTKPRIPLKYADLLDIAQQVAVGMEFLAQNKVVHRDLAARNVLISVDRSIKIADFG 761
              |:.|.:|           |||.|..|:|.||::||....||||||.||||||..:.|:|||||
 Worm  1011 --FNSLCTS-----------DLLSIGLQIANGMDWLANIPCVHRDLACRNVLISKTKIIRIADFG 1062

  Fly   762 LSRDVYHENVYR-KSGGSGKLPIKWLALESLTHQVYTSQSDVWSFGVLLYEITTLGGMPYPSVSP 825
            |::....:..|| :......||::|:.|||:|...:|.:|||||:|:.||||.||||.|||....
 Worm  1063 LAKKHTDKAYYRVRESLDTPLPVRWMPLESITDLTFTQKSDVWSYGICLYEIFTLGGTPYPDCPN 1127

  Fly   826 SDLLQLLRQGHRMKRPEGCTQEMFSLMESCWSSVPSHRPTFS 867
            ..|::.::.|:..|||..|.::::.:|:.||.:.|..||||:
 Worm  1128 FSLVEYIKTGNINKRPSNCHKDVYKIMKMCWQASPDDRPTFA 1169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
torNP_476762.1 FN3 199..261 CDD:214495 11/76 (14%)
STYKc 475..873 CDD:214568 119/409 (29%)
PTKc 479..873 CDD:270623 119/405 (29%)
ver-4NP_509835.2 ig 609..679 CDD:278476 17/92 (18%)
IG_like 611..692 CDD:214653 17/103 (17%)
IG_like 709..782 CDD:214653 16/85 (19%)
IGc2 714..772 CDD:197706 13/70 (19%)
STYKc 870..1175 CDD:214568 119/409 (29%)
PTKc 874..1176 CDD:270623 119/405 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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