DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tor and Flt4

DIOPT Version :10

Sequence 1:NP_476762.1 Gene:tor / 35717 FlyBaseID:FBgn0003733 Length:923 Species:Drosophila melanogaster
Sequence 2:NP_032055.1 Gene:Flt4 / 14257 MGIID:95561 Length:1363 Species:Mus musculus


Alignment Length:887 Identity:228/887 - (25%)
Similarity:344/887 - (38%) Gaps:264/887 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 ALRKVQENYQMNMICRTESEIVFQ--------ID-WVQHSRGTEPAPNATYI-----------IR 113
            :||:.|:...|.. ||...|:..|        :| |.:...|.....:...|           :.
Mouse   473 SLRRRQQRDGMPQ-CRDWKEVTTQDAVNPIESLDSWTEFVEGKNKTVSKLVIQDANVSAMYKCVV 536

  Fly   114 VDAVKDDNKETALYLS--DDNFLI--------LPGLE-------SNSTH--------NITALAMH 153
            |:.|..|.:....|::  .|.|.|        |.|..       .|.|:        |::.|...
Mouse   537 VNKVGQDERLIYFYVTTIPDGFSIESEPSEDPLEGQSVRLSCRADNYTYEHLRWYRLNLSTLHDA 601

  Fly   154 GDGSYSLIAKD-QTFAT-LIRGYQPSKMGA--VNLLRFVPQ--PDDLHHIAAEIEWKPSAESNCY 212
            ......|..|: ..||| |....:.::.||  ..|...:|:  |:|......|::.:.|.:.:|:
Mouse   602 QGNPLLLDCKNVHLFATPLEANLEEAEPGARHATLSLNIPRVAPEDEGDYVCEVQDRRSQDKHCH 666

  Fly   213 FDMVSYSTNSVNMDEPLEVQFRDRKKLYRHTVDNLEFDKQYHVGVRTVNIMNRLESDLQWLPIA- 276
                         .:.|.||..:..:|.::..|.|            ||:.:.||   ...|:| 
Mouse   667 -------------KKYLSVQALEAPRLTQNLTDLL------------VNVSDSLE---MRCPVAG 703

  Fly   277 --VPSCLDWYPYNYTLCPPHKPENLTVTQKQYLPNILALNITWARPRYLPDNYTLHIFDLFKGGT 339
              |||.: ||          |.|.|  .:|:                               .|.
Mouse   704 AHVPSIV-WY----------KDERL--LEKE-------------------------------SGI 724

  Fly   340 ELNYTLDQNRSHFYVPKITVLGSHFEVHLVAQSAGGK------NVSGLTLDKVHRGVLLSE--GN 396
            :|   .|.|:             ...:..|.:...|:      |..|.........|..||  |:
Mouse   725 DL---ADSNQ-------------RLSIQRVREEDAGRYLCSVCNAKGCVNSSASVAVEGSEDKGS 773

  Fly   397 MVKLVLF---IIVPICCILMLCSLTFCRRNRSEVQALQMDAKDAKASEFHLSLMDSSGLLVTLSA 458
            |..::|.   :|.....:|:|  |.||...|    ....|.|..     :||::...|   .:..
Mouse   774 MEIVILIGTGVIAVFFWVLLL--LIFCNMKR----PAHADIKTG-----YLSIIMDPG---EVPL 824

  Fly   459 NESLEVM----DELEVEPHSVLLQDVLGEGAFGLVRR----GVYKKRQ---VAVKLLKDEPNDED 512
            .|..|.:    .:.|.....:.|..|||.||||.|..    |:.|...   ||||:||:.....:
Mouse   825 EEQCEYLSYDASQWEFPRERLHLGRVLGHGAFGKVVEASAFGINKGSSCDTVAVKMLKEGATASE 889

  Fly   513 VYAFKCEIQMLKAVGKHPNIVGIVGYSTRFSNQMMLLIEYCSLGSLQNFLREEWKFRQEQNAIGL 577
            ..|...|:::|..:|.|.|:|.::|..|:.:..:|:::|:|..|:|.||||.:   |...|... 
Mouse   890 HRALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRVK---RDTFNPYA- 950

  Fly   578 KKNLEQNVDNRRFNRLPRNSIHDRIEDINNSMLSTVEEESESDQTHSSRCETYTLTRITNAADNK 642
            :|:.||   .|||..:...:..||            .....||:.      .:|...:...:..:
Mouse   951 EKSPEQ---RRRFRAMVEGAKADR------------RRPGSSDRA------LFTRFLMGKGSARR 994

  Fly   643 GYGLEDIENIGGSYIPKTAEAPKDRPKRKLKPQPKKDSKQDFKSDNKKRIFENKEYFDCLDSSDT 707
            ...:::.|::..|                                                    
Mouse   995 APLVQEAEDLWLS---------------------------------------------------- 1007

  Fly   708 KPRIPLKYADLLDIAQQVAVGMEFLAQNKVVHRDLAARNVLISVDRSIKIADFGLSRDVYHENVY 772
                ||...||:..:.|||.||||||..|.:||||||||:|:|....:||.||||:||:|.:..|
Mouse  1008 ----PLTMEDLVCYSFQVARGMEFLASRKCIHRDLAARNILLSESDIVKICDFGLARDIYKDPDY 1068

  Fly   773 -RKSGGSGKLPIKWLALESLTHQVYTSQSDVWSFGVLLYEITTLGGMPYPSVS-PSDLLQLLRQG 835
             ||  ||.:||:||:|.||:..:|||:|||||||||||:||.:||..|||.|. ..:..|.|:.|
Mouse  1069 VRK--GSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDG 1131

  Fly   836 HRMKRPEGCTQEMFSLMESCWSSVPSHRPTFSALKHRLGGMI 877
            .||:.||..|..:..:|:||||..|..||.||.|...||.::
Mouse  1132 TRMRAPELATPAIRHIMQSCWSGDPKARPAFSDLVEILGDLL 1173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
torNP_476762.1 PTKc 479..873 CDD:270623 135/402 (34%)
Flt4NP_032055.1 IgI_VEGFR 230..329 CDD:409448
Ig strand A 230..234 CDD:409448
Ig strand A' 240..244 CDD:409448
Ig strand B 246..255 CDD:409448
Ig strand C 262..267 CDD:409448
Ig strand C' 270..272 CDD:409448
Ig strand D 276..284 CDD:409448
Ig strand E 289..297 CDD:409448
Ig strand F 307..313 CDD:409448
Ig strand G 318..324 CDD:409448
Ig 331..418 CDD:472250
Ig strand B 352..356 CDD:409449
Ig strand C 365..369 CDD:409449
Ig strand E 382..386 CDD:409449
Ig strand F 396..401 CDD:409449
Ig strand G 411..414 CDD:409449
IG_like 570..663 CDD:214653 19/92 (21%)
Ig strand B 574..578 CDD:409353 0/3 (0%)
Ig strand C 587..591 CDD:409353 0/3 (0%)
Ig strand E 636..640 CDD:409353 1/3 (33%)
Ig strand F 650..655 CDD:409353 0/4 (0%)
Ig 678..765 CDD:472250 26/161 (16%)
Ig strand B 695..699 CDD:409353 2/6 (33%)
Ig strand C 708..712 CDD:409353 1/4 (25%)
Ig strand E 731..735 CDD:409353 0/16 (0%)
Ig strand F 745..750 CDD:409353 0/4 (0%)
VEGFR-2_TMD 770..804 CDD:375470 10/39 (26%)
Protein Kinases, catalytic domain 837..1175 CDD:473864 139/420 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1288..1330
Blue background indicates that the domain is not in the aligned region.

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