DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tor and tie1

DIOPT Version :9

Sequence 1:NP_476762.1 Gene:tor / 35717 FlyBaseID:FBgn0003733 Length:923 Species:Drosophila melanogaster
Sequence 2:XP_002931650.3 Gene:tie1 / 100496664 XenbaseID:XB-GENE-922217 Length:1127 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
torNP_476762.1 FN3 199..261 CDD:214495
STYKc 475..873 CDD:214568
PTKc 479..873 CDD:270623
tie1XP_002931650.3 IG_like 124..203 CDD:214653
EGF_CA <222..247 CDD:238011
EGF_CA 306..336 CDD:238011
Ig 341..432 CDD:416386
Ig strand A 341..345 CDD:409353
Ig strand A' 351..355 CDD:409353
Ig strand B 358..367 CDD:409353
Ig strand C 375..380 CDD:409353
Ig strand C' 384..386 CDD:409353
Ig strand D 390..394 CDD:409353
Ig strand E 397..405 CDD:409353
Ig strand F 413..421 CDD:409353
Ig strand G 424..432 CDD:409353
fn3 448..511 CDD:394996
FN3 633..724 CDD:238020
PTKc_Tie1 826..1122 CDD:270671
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24416
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.