DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tor and styk1

DIOPT Version :9

Sequence 1:NP_476762.1 Gene:tor / 35717 FlyBaseID:FBgn0003733 Length:923 Species:Drosophila melanogaster
Sequence 2:NP_001123790.1 Gene:styk1 / 100170540 XenbaseID:XB-GENE-979179 Length:419 Species:Xenopus tropicalis


Alignment Length:510 Identity:121/510 - (23%)
Similarity:198/510 - (38%) Gaps:172/510 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 IIVPI----CCILMLCSLTFCR-RNRSEVQALQMDAKDAKASEFHLSLMDSSGLLVTLSANESLE 463
            |:||:    ..:::|..:.:.| |.|...:..|...:..|.|..:::...|   |..|:.::.|.
 Frog    33 IVVPVFLIGVSVILLAIILWLRYRPRKPDEDDQRQDEQRKPSAGYINHAIS---LEELTLDQVLR 94

  Fly   464 VMD----ELEVEPHSVLLQ--DVLGEGAFGLVRRGVY------KKRQVAVKLLKDEPNDEDVYAF 516
            ..|    .||: |...:.|  .:.|||.||.:.|...      |::.|.:|.|::....:::..|
 Frog    95 TKDPSLQALEI-PRGRIRQPLQLAGEGRFGPIYRTKLNGPEDGKEKDVIIKRLRNSCGAQEIRDF 158

  Fly   517 KCEIQMLKAVGKHPNIVGIVGYSTRFSNQMMLLIEYCSLGSLQNFLREEWKFRQEQNAI-GLKKN 580
            ...:.....:|:|||||.::|.... .....:::|....|||.:||   |..|::..:: |:   
 Frog   159 LQRVAFQGWLGQHPNIVELLGCCPN-EKPFCMVLENIEPGSLLHFL---WDCRRDVMSMDGI--- 216

  Fly   581 LEQNVDNRRFNRLPRNSIHDRIEDINNSMLSTVEEESESDQTHSSRCETYTLTRITNAADNKGYG 645
                             ::|..|                       |:.||              
 Frog   217 -----------------LYDLTE-----------------------CQVYT-------------- 227

  Fly   646 LEDIENIGGSYIPKTAEAPKDRPKRKLKPQPKKDSKQDFKSDNKKRIFENKEYFDCLDSSDTKPR 710
                                                                             
 Frog   228 ----------------------------------------------------------------- 227

  Fly   711 IPLKYADLLDIAQQVAVGMEFLAQNKVVHRDLAARNVLISVDRSIKIADFGLSRDVYHENVYRKS 775
                      ||.||...:.||.|.|:.|.||||||:||..:.:.|:...|.:.::      |::
 Frog   228 ----------IALQVLSALGFLHQRKLFHGDLAARNILIHRNLTAKLTGLGGACEM------RQT 276

  Fly   776 G---GSGKLPIKWLALESLTHQVYTSQSDVWSFGVLLYEITTLGGMPYPSVSPSDLLQLLRQGHR 837
            |   .....|:||:|.|.|.....:::|||||||:||||:.|||..|||.:.|:|:||.|::|:.
 Frog   277 GTFPSRRPAPLKWMAPERLLRLPISAKSDVWSFGILLYEMITLGAPPYPEIPPNDILQHLQRGNI 341

  Fly   838 MKRPEGCTQEMFSLMESCWSSVPSHRPTFSALKHRLGGMILATND-----VPERL 887
            ||||..|...|:::|:.||......||:...|:.||.....|:||     |||::
 Frog   342 MKRPPTCKPAMYNVMKICWLWKAPERPSLPELRKRLESAKKASNDKTVLQVPEQV 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
torNP_476762.1 FN3 199..261 CDD:214495
STYKc 475..873 CDD:214568 95/409 (23%)
PTKc 479..873 CDD:270623 94/403 (23%)
styk1NP_001123790.1 PTKc 118..378 CDD:270623 95/401 (24%)
STYKc 118..377 CDD:214568 94/400 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.