Sequence 1: | NP_001260788.1 | Gene: | LRR / 35715 | FlyBaseID: | FBgn0033212 | Length: | 1486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031756568.1 | Gene: | LOC100491722 / 100491722 | -ID: | - | Length: | 701 | Species: | Xenopus tropicalis |
Alignment Length: | 715 | Identity: | 241/715 - (33%) |
---|---|---|---|
Similarity: | 396/715 - (55%) | Gaps: | 54/715 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 SQLTKDLNESVKSILGRHTKILVKYM------------VKLETKGDKTENRVLVFTPVRVYLLSA 57
Fly 58 KVPTKIECHFHYLDIVGVESKKSTHFSIVTNDRPYSFVTTGDAGNFSSVRHNHLLNADVILTDLA 122
Fly 123 SAIKQIFPTVPLKYIIRKIDIQPPERETIFSEEFRPSDPRNVGPCGGFSAQYACMCDFHGVPYRE 187
Fly 188 EVAWDVDTIYLSHDTRVLNLRDFDHLEPKDLMAIVSALEYNTFFRGLKAAHMRLSHETLERILHV 252
Fly 253 LKRSMWLEELHLEALGLRWDFLNKLSISVITNSNPAIRTIDLSHNIIEDKGASSLCALFGKIVQG 317
Fly 318 AIHLAGPIAKVSKGLCKLALAHCGLTSKGVNQMSHSLTLNQSISNSLTYLDLSGNS---LKDDIT 379
Fly 380 NLHNFLAQPNVLEHLDLASTDITLENLFGALLRGCATHLAHLNVSHNSFSTKKGKEIPPSFKQFF 444
Fly 445 TSTFSLKHLNIAGCKLPMEALKNLLLGLACNESTAGLYLDLSSNTLGAQGAHVLESCIHGVRVLQ 509
Fly 510 SLDISDNNLDAELAPVLTAISKNPSIRTLHLTRSLTGMKPKHIPPVMDALVNLIQKDDFPLVELV 574
Fly 575 LSENKLKHDLHDFINALGSNQSLQKLDISGNFMGDVGARLLAKALQINNRLRTIYMDKNGVTLQG 639
Fly 640 YADIVYALEHNHSMRTIPFPVFDIAPHLKSHPDKTDAVMRKMQELLQRN----------CNGLKR 694
Fly 695 694 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRR | NP_001260788.1 | LRR_RI | 198..516 | CDD:238064 | 120/320 (38%) |
leucine-rich repeat | 289..331 | CDD:275381 | 14/41 (34%) | ||
leucine-rich repeat | 332..352 | CDD:275381 | 6/19 (32%) | ||
leucine-rich repeat | 364..389 | CDD:275380 | 10/27 (37%) | ||
leucine-rich repeat | 391..417 | CDD:275380 | 14/25 (56%) | ||
leucine-rich repeat | 418..449 | CDD:275380 | 16/30 (53%) | ||
LRR_RI | 441..>656 | CDD:238064 | 82/214 (38%) | ||
leucine-rich repeat | 450..467 | CDD:275380 | 10/16 (63%) | ||
leucine-rich repeat | 468..503 | CDD:275380 | 12/34 (35%) | ||
leucine-rich repeat | 508..534 | CDD:275380 | 7/25 (28%) | ||
leucine-rich repeat | 535..564 | CDD:275380 | 4/28 (14%) | ||
leucine-rich repeat | 570..596 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 597..618 | CDD:275380 | 14/20 (70%) | ||
CARMIL_C | 797..1108 | CDD:292619 | |||
LOC100491722 | XP_031756568.1 | Carm_PH | 36..128 | CDD:407743 | 25/106 (24%) |
LRR_RI | 234..521 | CDD:423007 | 111/300 (37%) | ||
leucine-rich repeat | 287..311 | CDD:275381 | 8/23 (35%) | ||
leucine-rich repeat | 316..349 | CDD:275381 | 14/46 (30%) | ||
leucine-rich repeat | 350..377 | CDD:275381 | 10/26 (38%) | ||
leucine-rich repeat | 378..404 | CDD:275381 | 14/25 (56%) | ||
LRR_RI | 426..686 | CDD:423007 | 92/259 (36%) | ||
leucine-rich repeat | 437..467 | CDD:275381 | 14/29 (48%) | ||
leucine-rich repeat | 522..548 | CDD:275380 | 2/25 (8%) | ||
leucine-rich repeat | 549..583 | CDD:275380 | 12/33 (36%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D368769at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |