Sequence 1: | NP_001260788.1 | Gene: | LRR / 35715 | FlyBaseID: | FBgn0033212 | Length: | 1486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001257691.1 | Gene: | Rnh1 / 100360501 | RGDID: | 621398 | Length: | 492 | Species: | Rattus norvegicus |
Alignment Length: | 506 | Identity: | 121/506 - (23%) |
---|---|---|---|
Similarity: | 178/506 - (35%) | Gaps: | 142/506 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 255 RSMWLEELH----------LEALG-LRWDFLNKL--------------------SISVITNSNPA 288
Fly 289 IRTIDLSHNIIEDKGASSLCALFGKIVQGAIHLAGPIAKVSKGLCKLALAHCGLTSKGVNQMSHS 353
Fly 354 LTLNQSISNSLTYLDLSGNSLKDD-ITNLHNFLAQPNV-LEHLDLASTDITLENL--FGALLRGC 414
Fly 415 ATHLAHLNVSHNSFSTKKGKEIPPSFKQFFTSTFSLKHLNIAGCKLPMEALKNLLLGLACN--ES 477
Fly 478 TAGLY-LDLSSNTLGAQGAHVL-----------------------ESCIHGVRVLQS------LD 512
Fly 513 ISDNNLDAELAPVLTAISKNPSIRTLHL---TRSLTGMKPKHIPPVMDALVNLIQKDDFPLVELV 574
Fly 575 LSENKLKHDLHDFINALGSNQSLQKLDISGNFMGDVGARLLAKALQI-NNRLRTIYMDKNGVTLQ 638
Fly 639 GYADIVYALEHNHSMRTIPFPVFDIAPHLKSHPDKTDAVMRKMQELLQRNC 689 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRR | NP_001260788.1 | LRR_RI | 198..516 | CDD:238064 | 80/327 (24%) |
leucine-rich repeat | 289..331 | CDD:275381 | 10/41 (24%) | ||
leucine-rich repeat | 332..352 | CDD:275381 | 7/19 (37%) | ||
leucine-rich repeat | 364..389 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 391..417 | CDD:275380 | 7/27 (26%) | ||
leucine-rich repeat | 418..449 | CDD:275380 | 6/30 (20%) | ||
LRR_RI | 441..>656 | CDD:238064 | 62/250 (25%) | ||
leucine-rich repeat | 450..467 | CDD:275380 | 3/16 (19%) | ||
leucine-rich repeat | 468..503 | CDD:275380 | 16/60 (27%) | ||
leucine-rich repeat | 508..534 | CDD:275380 | 7/31 (23%) | ||
leucine-rich repeat | 535..564 | CDD:275380 | 6/31 (19%) | ||
leucine-rich repeat | 570..596 | CDD:275380 | 3/25 (12%) | ||
leucine-rich repeat | 597..618 | CDD:275380 | 8/20 (40%) | ||
CARMIL_C | 797..1108 | CDD:292619 | |||
Rnh1 | NP_001257691.1 | LRR_RI | 37..356 | CDD:238064 | 84/345 (24%) |
leucine-rich repeat | 38..60 | CDD:275380 | 6/21 (29%) | ||
LRR | <46..361 | CDD:227223 | 86/341 (25%) | ||
leucine-rich repeat | 61..88 | CDD:275380 | 2/26 (8%) | ||
leucine-rich repeat | 89..113 | CDD:275380 | 8/33 (24%) | ||
leucine-rich repeat | 118..145 | CDD:275380 | 10/34 (29%) | ||
leucine-rich repeat | 146..174 | CDD:275380 | 9/27 (33%) | ||
leucine-rich repeat | 175..202 | CDD:275380 | 7/27 (26%) | ||
leucine-rich repeat | 203..231 | CDD:275380 | 6/30 (20%) | ||
leucine-rich repeat | 232..259 | CDD:275380 | 7/31 (23%) | ||
leucine-rich repeat | 260..288 | CDD:275380 | 10/27 (37%) | ||
leucine-rich repeat | 289..309 | CDD:275380 | 2/19 (11%) | ||
leucine-rich repeat | 317..336 | CDD:275380 | 5/18 (28%) | ||
LRR_RI | 318..>465 | CDD:238064 | 42/185 (23%) | ||
leucine-rich repeat | 374..402 | CDD:275380 | 11/27 (41%) | ||
leucine-rich repeat | 403..430 | CDD:275380 | 7/26 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166336034 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |