Sequence 1: | NP_001260788.1 | Gene: | LRR / 35715 | FlyBaseID: | FBgn0033212 | Length: | 1486 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031759347.1 | Gene: | carmil1 / 100145775 | XenbaseID: | XB-GENE-988355 | Length: | 1402 | Species: | Xenopus tropicalis |
Alignment Length: | 1474 | Identity: | 501/1474 - (33%) |
---|---|---|---|
Similarity: | 762/1474 - (51%) | Gaps: | 238/1474 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 SQLTKDLNESVKSILGRHTKILVKYMVKLETKGDKTENRVLVFTPVRVYLLSAKVPTKIECHFHY 69
Fly 70 LDIVGVESKKSTHFSIVTNDRPYSFVTTGDAGNFSSVRHNHLLNADVILTDLASAIKQIFPTV-P 133
Fly 134 LKYIIRKIDIQPPERETIFSEEFRPSDPRNVGPCGGFSAQYACMCDFHGVPYREEVAWDVDTIYL 198
Fly 199 SHDTRVLNLRDFDHLEPKDLMAIVSALEYNTFFRGLKAAHMRLSHETLERILHVLKRSMWLEELH 263
Fly 264 LEALGLRWDFLNKLSISVITNSNPAIRTIDLSHNIIEDKGASSLCALFGKIVQGAIH-LAGPIAK 327
Fly 328 VSKGLCKLALAHCGLTSKGVNQMSHSLTLNQSISNSLTYLDLSGNSLK-DDITNLHNFLAQPNVL 391
Fly 392 EHLDLASTDITLENLFGALLRGCATHLAHLNVSHNSFSTKKGKEIPPSFKQFFTSTFSLKHLNIA 456
Fly 457 GCKLPMEALKNLLLGLACNESTAGLYLDLSSNTLG----AQGAHVLESCIHGVRVLQSLDISDNN 517
Fly 518 LDAELAPVLTAISKNPSIRTLHLTRSLTGMKPKHIPPVMDALVNLIQKDDFPLVELVLSENKLKH 582
Fly 583 DLHDFINALGSNQSLQKLDISGNFMGDVGARLLAKALQINNRLRTIYMDKNGVTLQGYADIVYAL 647
Fly 648 EHNHSMRTIPFPVFDIAPHLKSHPDKTDAVMRKMQELLQRNCNGLKRATGQGFRLQHGFMLSSTH 712
Fly 713 QLVDKLVAETQDTI-SLAKGG----SESASAVQRLITDAENCKQLMPKLQE-------AVRNESH 765
Fly 766 PIEMKMTRVASELSYTIKSYLEETMETMMRTGIEQCPKTLGNQIVVQDLRKALAERLVVPEEFLQ 830
Fly 831 ICLLNNAGSEIMNKVGEIEQSLAAAISDRATDEVLEALTR---------YRRGMGIAESPSVLLD 886
Fly 887 EPQTPDIVRSRSSHDADGLIIRPGGRGSILPKLGLESPTKLEYLNLA--------TPHLPTKRRS 943
Fly 944 L-AKKVRPQSVVENL------SLGHFPDLLESPSSHRSNSQLSARAAAGAAALVGAANMTDSIAV 1001
Fly 1002 DDGGVDECCDSITELPS-ASFQLQHLVKGRPKRAKTRAPTRPL-------VTTECAGGSREIGEG 1058
Fly 1059 LEHFFRPGSVTPTTLTPLVSPTSEECSSLSFVDSPTMSRDGNGHMTSEETTPILEERRPIKLERQ 1123
Fly 1124 SPLLKSASWATRSRS---TDNLEKYSPLVGRKSPL------VKMRTEGGPGSGSATG------AE 1173
Fly 1174 ETSMPSS---NLLKATAREDKTRSPSSDSIKSHAAGEGSVIVKTGNGILRTPIVLQKPRPWSVVG 1235
Fly 1236 SEPKAGGDLITGNGNADSSKTTPDKLEEDDVEIVTFGNTCSGSIVGITPGIALSTS------GGG 1294
Fly 1295 SIVGITPGGALEKKSVRELAAGLNRMELPLKPPVMPRTLLNATSVRTSTSSTGSTSNSVSVSSST 1359
Fly 1360 NANTSMTVLNQSQTRSRIVSSTSSTDSTETITERSTTSTSSSSS 1403 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRR | NP_001260788.1 | LRR_RI | 198..516 | CDD:238064 | 157/323 (49%) |
leucine-rich repeat | 289..331 | CDD:275381 | 12/42 (29%) | ||
leucine-rich repeat | 332..352 | CDD:275381 | 8/19 (42%) | ||
leucine-rich repeat | 364..389 | CDD:275380 | 17/25 (68%) | ||
leucine-rich repeat | 391..417 | CDD:275380 | 9/25 (36%) | ||
leucine-rich repeat | 418..449 | CDD:275380 | 19/30 (63%) | ||
LRR_RI | 441..>656 | CDD:238064 | 114/218 (52%) | ||
leucine-rich repeat | 450..467 | CDD:275380 | 8/16 (50%) | ||
leucine-rich repeat | 468..503 | CDD:275380 | 20/38 (53%) | ||
leucine-rich repeat | 508..534 | CDD:275380 | 12/25 (48%) | ||
leucine-rich repeat | 535..564 | CDD:275380 | 12/28 (43%) | ||
leucine-rich repeat | 570..596 | CDD:275380 | 14/25 (56%) | ||
leucine-rich repeat | 597..618 | CDD:275380 | 14/20 (70%) | ||
CARMIL_C | 797..1108 | CDD:292619 | 77/342 (23%) | ||
carmil1 | XP_031759347.1 | Carm_PH | 26..119 | CDD:407743 | 33/104 (32%) |
LRR_RI | <229..373 | CDD:423007 | 73/158 (46%) | ||
leucine-rich repeat | 248..275 | CDD:275378 | 15/26 (58%) | ||
leucine-rich repeat | 278..306 | CDD:275380 | 12/42 (29%) | ||
LRR_RI | 307..628 | CDD:423007 | 168/320 (53%) | ||
leucine-rich repeat | 307..338 | CDD:275380 | 14/30 (47%) | ||
leucine-rich repeat | 339..360 | CDD:275380 | 12/20 (60%) | ||
leucine-rich repeat | 361..393 | CDD:275380 | 14/31 (45%) | ||
leucine-rich repeat | 394..425 | CDD:275380 | 19/30 (63%) | ||
leucine-rich repeat | 426..453 | CDD:275380 | 17/26 (65%) | ||
leucine-rich repeat | 454..487 | CDD:275380 | 13/32 (41%) | ||
leucine-rich repeat | 505..541 | CDD:275380 | 15/35 (43%) | ||
leucine-rich repeat | 550..576 | CDD:275380 | 14/25 (56%) | ||
leucine-rich repeat | 577..604 | CDD:275380 | 20/26 (77%) | ||
CARMIL_C | 789..1084 | CDD:406410 | 82/365 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 200 | 1.000 | Domainoid score | I2975 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H9757 | |
Inparanoid | 1 | 1.050 | 680 | 1.000 | Inparanoid score | I709 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D208951at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002311 | |
OrthoInspector | 1 | 1.000 | - | - | otm47788 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2004 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.060 |